PDBsum entry 1jz4 Go to PDB code:  Tunnel analysis for: 1jz4 calculated with MOLE 2.0 PDB id 1jz4 Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   9 tunnels, coloured by tunnel radius 8 tunnels, coloured by tunnel radius 8 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.18 1.41 41.9 -0.23 0.29 13.2 73 5 3 3 7 5 0 0   2 1.22 1.40 65.6 0.33 0.30 8.7 71 5 1 5 10 9 0 0  DMS 8503 A 3 1.22 1.44 67.2 -0.59 -0.01 11.8 80 5 5 4 7 5 1 0   4 1.19 1.41 78.2 0.11 0.16 8.8 72 5 5 6 11 12 0 0  DMS 8407 A DMS 8427 B 5 1.17 1.37 24.8 -0.96 -0.23 14.3 73 3 2 1 2 0 3 1  DMS 8404 D DMS 8501 D 6 1.28 1.54 27.0 -1.18 -0.40 20.7 73 3 4 0 5 0 4 0  DMS 8404 D DMS 8501 D 7 1.32 1.35 24.8 -0.79 -0.22 13.0 77 3 3 2 2 0 3 1  DMS 8404 A DMS 8501 A 8 1.23 1.30 24.3 -1.60 -0.37 3.9 87 1 0 9 1 2 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.