PDBsum entry 1jtr Go to PDB code:  Pore analysis for: 1jtr calculated with MOLE 2.0 PDB id 1jtr Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   14 pores, coloured by radius 7 pores, coloured by radius 7 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.25 1.41 45.7 -0.42 0.19 11.2 79 5 2 2 5 6 2 0  GOL 903 2 2.00 2.01 77.0 -0.51 -0.18 10.4 77 3 6 4 5 4 3 0  GOL 903 NAG 812 X NAG 813 X 3 1.52 1.62 90.9 -1.13 -0.45 11.6 86 5 3 8 3 3 2 0   4 1.26 1.44 96.2 -0.40 -0.02 11.5 77 6 6 4 9 8 3 0  NAG 812 X NAG 813 X 5 1.27 1.26 178.8 -1.44 -0.36 17.2 81 10 10 10 9 5 4 0  GOL 903 6 1.25 1.12 183.5 -1.66 -0.47 16.7 82 11 10 10 6 5 3 0   7 1.72 1.96 228.6 -1.49 -0.34 15.9 79 16 10 11 4 9 5 1  NAG 814 W NAG 815 W MAN 816 W Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.