PDBsum entry 1jal Go to PDB code:  Pore analysis for: 1jal calculated with MOLE 2.0 PDB id 1jal Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   4 pores, coloured by radius 4 pores, coloured by radius 4 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 2.28 2.43 53.8 -0.78 -0.36 9.7 85 4 3 4 7 0 1 0   2 2.30 2.44 57.4 -0.63 -0.42 9.6 80 3 4 4 8 0 1 0   3 2.30 2.44 58.5 -0.68 -0.43 9.0 83 3 5 5 7 0 1 0   4 1.77 1.92 31.5 -1.53 -0.38 17.6 74 1 4 1 2 0 4 1   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.