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PDBsum entry 1jal
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Tunnel analysis for: 1jal calculated with  MOLE 2.0
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PDB id
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1jal
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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6 tunnels,
coloured by tunnel radius |
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6 tunnels,
coloured by
tunnel radius
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6 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.25 |
2.38 |
26.6 |
0.50 |
0.26 |
10.4 |
89 |
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2 |
1 |
1 |
7 |
1 |
1 |
0 |
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2 |
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1.25 |
2.59 |
35.5 |
-0.06 |
0.22 |
14.9 |
89 |
3 |
3 |
3 |
9 |
1 |
0 |
0 |
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3 |
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1.26 |
2.58 |
38.8 |
0.16 |
0.18 |
14.4 |
90 |
2 |
5 |
2 |
9 |
1 |
0 |
0 |
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4 |
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1.23 |
2.34 |
41.9 |
0.09 |
0.22 |
14.2 |
90 |
4 |
3 |
2 |
10 |
1 |
0 |
0 |
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5 |
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1.52 |
1.74 |
15.1 |
0.05 |
-0.10 |
13.0 |
80 |
1 |
1 |
1 |
3 |
2 |
0 |
0 |
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6 |
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1.59 |
1.79 |
16.8 |
-0.90 |
-0.24 |
21.9 |
85 |
1 |
2 |
0 |
3 |
1 |
0 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program