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PDBsum entry 1gqg
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Tunnel analysis for: 1gqg calculated with  MOLE 2.0
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PDB id
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1gqg
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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4 tunnels,
coloured by tunnel radius |
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16 tunnels,
coloured by
tunnel radius
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16 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.19 |
1.19 |
42.6 |
-1.52 |
-0.61 |
20.4 |
84 |
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5 |
4 |
4 |
1 |
2 |
1 |
0 |
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2 |
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1.20 |
2.43 |
44.7 |
-1.74 |
-0.66 |
21.2 |
85 |
5 |
4 |
5 |
1 |
2 |
1 |
0 |
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3 |
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1.20 |
1.19 |
46.1 |
-0.92 |
-0.51 |
11.4 |
92 |
3 |
3 |
12 |
3 |
2 |
1 |
0 |
NAG 1 G
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4 |
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1.21 |
1.39 |
48.1 |
-1.16 |
-0.54 |
12.7 |
93 |
3 |
3 |
13 |
3 |
2 |
1 |
0 |
NAG 1 G
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5 |
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1.19 |
1.19 |
51.2 |
-1.56 |
-0.59 |
15.3 |
94 |
3 |
3 |
10 |
2 |
2 |
1 |
0 |
NAG 1354 B
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6 |
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1.22 |
2.44 |
53.2 |
-1.73 |
-0.61 |
16.0 |
94 |
3 |
3 |
11 |
2 |
2 |
1 |
0 |
NAG 1354 B
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7 |
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1.20 |
1.19 |
54.5 |
-1.48 |
-0.57 |
13.9 |
93 |
3 |
4 |
12 |
2 |
2 |
1 |
0 |
NAG 1354 B
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8 |
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1.22 |
1.39 |
56.6 |
-1.62 |
-0.59 |
14.7 |
93 |
4 |
4 |
13 |
2 |
2 |
1 |
0 |
NAG 1354 B
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9 |
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1.19 |
1.34 |
43.4 |
-1.33 |
-0.56 |
11.8 |
93 |
1 |
2 |
10 |
2 |
2 |
1 |
0 |
NAG 1 F NAG 2 F
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10 |
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1.21 |
1.22 |
48.2 |
-0.94 |
-0.54 |
9.2 |
93 |
1 |
2 |
12 |
3 |
2 |
1 |
0 |
NAG 1 E NAG 2 E BMA 3 E
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11 |
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1.44 |
1.45 |
21.6 |
1.30 |
0.69 |
12.3 |
74 |
3 |
2 |
0 |
6 |
5 |
0 |
0 |
DCD 1351 C CU 1352 C
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12 |
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1.48 |
1.51 |
22.7 |
2.14 |
0.87 |
3.9 |
72 |
1 |
1 |
0 |
6 |
4 |
0 |
0 |
DCD 1351 C CU 1352 C
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13 |
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1.40 |
1.40 |
28.1 |
1.80 |
0.77 |
10.8 |
76 |
3 |
1 |
0 |
11 |
4 |
0 |
0 |
DCD 1351 C CU 1352 C
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14 |
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1.46 |
1.51 |
29.2 |
2.56 |
0.94 |
4.2 |
75 |
1 |
0 |
0 |
11 |
3 |
0 |
0 |
DCD 1351 C CU 1352 C
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15 |
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1.55 |
1.62 |
22.9 |
1.88 |
0.74 |
4.9 |
75 |
1 |
1 |
0 |
6 |
4 |
0 |
0 |
DCD 1351 B
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16 |
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1.54 |
1.65 |
18.1 |
-1.02 |
-0.36 |
16.3 |
67 |
2 |
2 |
0 |
1 |
3 |
0 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program