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PDBsum entry 1fjf
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Tunnel analysis for: 1fjf calculated with  MOLE 2.0
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PDB id
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1fjf
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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1 tunnel,
coloured by tunnel radius |
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3 tunnels,
coloured by
tunnel radius
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3 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.19 |
3.65 |
129.8 |
0.00 |
-0.15 |
11.5 |
83 |
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8 |
2 |
0 |
12 |
0 |
1 |
1 |
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UNX 22 UNX 32 UNX 67 G 568 A C 569 A G 654 A A
655 A C 656 A G 657 A G 658 A U 659 A G 660 A G
661 A G 662 A U 743 A C 744 A C 745 A A 746 A C
747 A C 748 A G 821 A C 822 A G 823 A C 824 A G
825 A G 852 A G 853 A C 862 A U 871 A A 872 A A
873 A G 874 A C 875 A G 876 A C 877 A
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2 |
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1.38 |
1.31 |
151.8 |
-0.17 |
-0.17 |
11.9 |
84 |
11 |
2 |
1 |
13 |
1 |
1 |
1 |
UNX 12 UNX 27 UNX 34 UNX 150 A 10 A G 11 A U 12 A
U 17 A C 18 A C 19 A U 20 A G 21 A U 421 A C 422
A G 506 A U 512 A C 513 A C 514 A A 532 A U 534 A
U 560 A U 561 A G 567 A G 568 A C 862 A G 876 A G
1207 A
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3 |
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1.12 |
1.64 |
29.2 |
1.15 |
0.49 |
6.3 |
66 |
1 |
2 |
1 |
6 |
1 |
0 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program