PDBsum entry 1fjf Go to PDB code:  Pore analysis for: 1fjf calculated with MOLE 2.0 PDB id 1fjf Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   30 pores, coloured by radius 30 pores, coloured by radius 30 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.73 1.76 49.2 -1.29 -0.59 17.2 87 3 2 1 4 0 0 0  U 652 A A 653 A C 747 A C 748 A C 749 A U 827 A A 828 A G 829 A U 839 A U 850 A G 851 A G 858 A A 859 A 2 2.88 3.05 49.6 -0.71 -0.44 12.2 81 3 0 2 2 0 0 0  G 57 A C 58 A A 59 A G 61 A U 62 A C 99 A A 101 A G 102 A A 151 A A 152 A C 163 A U 164 A C 165 A C 335 A U 368 A C 369 A C 370 A G 371 A C 372 A C 386 A U 387 A G 388 A G 1435 A G 1461 A 3 3.33 3.33 51.3 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  UNX 14 G 57 A C 58 A A 59 A U 62 A C 63 A G 64 A G 69 A G 70 A U 90 A C 91 A C 92 A G 93 A U 95 A G 96 A G 97 A U 98 A C 99 A C 169 A U 368 A C 369 A C 370 A G 371 A C 372 A C 385 A C 386 A U 387 A G 388 A 4 2.73 4.17 64.9 -1.76 -0.69 20.1 71 5 5 1 0 2 1 0  UNX 71 U 5 A G 299 A A 300 A U 565 A G 566 A G 630 A G 858 A A 859 A A 860 A G 861 A C 862 A U 863 A G 867 A C 1076 A G 1077 A U 1078 A 5 2.47 2.47 65.5 -0.72 -0.77 7.1 83 1 0 0 0 0 0 0  G 57 A C 58 A A 59 A U 62 A C 63 A G 64 A U 65 A G 96 A G 97 A U 98 A C 99 A C 137 A G 138 A G 139 A C 201 A U 202 A C 218 A C 219 A U 368 A C 369 A C 370 A G 371 A C 372 A C 381 A A 382 A A 383 A C 385 A C 386 A U 387 A G 388 A C 455 A C 456 A A 460 A C 461 A G 462 A 6 2.48 2.48 73.9 -0.73 -0.77 7.1 83 1 0 1 0 0 0 0  UNX 14 G 64 A U 65 A G 69 A G 70 A C 91 A C 92 A G 93 A U 95 A G 96 A G 97 A U 98 A C 137 A G 138 A G 139 A C 169 A C 201 A U 202 A C 218 A C 219 A C 381 A A 382 A A 383 A C 455 A C 456 A A 460 A C 461 A G 462 A 7 1.54 1.54 83.0 -0.75 -0.76 8.0 72 1 0 0 0 0 0 0  UNX 26 UNX 35 U 5 A G 6 A G 29 A U 30 A G 44 A U 45 A G 57 A C 58 A C 295 A U 296 A G 297 A G 299 A A 300 A G 306 A C 307 A C 308 A C 355 A A 356 A U 368 A C 369 A C 370 A G 371 A G 388 A C 390 A G 391 A G 392 A A 393 A C 400 A A 611 A C 612 A C 623 A C 624 A G 630 A 8 3.12 3.13 84.1 -1.24 -0.72 13.6 73 4 1 1 0 0 1 0  UNX 22 UNX 29 UNX 32 U 652 A A 653 A G 654 A A 655 A C 656 A G 657 A G 658 A U 659 A G 660 A G 661 A G 662 A A 663 A G 664 A A 665 A G 667 A G 668 A U 669 A G 670 A G 671 A U 672 A G 714 A A 715 A A 733 A G 734 A C 735 A C 736 A U 740 A U 743 A C 744 A C 745 A C 747 A C 748 A C 749 A G 774 A C 806 A 9 2.74 4.05 97.3 -1.59 -0.73 19.5 72 5 5 0 0 1 1 0  UNX 67 U 5 A G 299 A A 300 A U 565 A G 566 A G 567 A G 568 A C 569 A G 630 A A 653 A G 654 A C 748 A C 749 A G 821 A C 822 A G 823 A C 824 A G 825 A C 826 A G 851 A G 852 A U 870 A U 871 A A 872 A A 873 A G 874 A C 875 A G 876 A C 877 A 10 1.99 2.03 103.9 -1.48 -0.76 16.8 83 5 3 2 0 0 0 0  UNX 35 UNX 166 U 5 A G 6 A A 26 A G 27 A G 28 A G 29 A U 296 A G 297 A G 299 A A 300 A A 415 A G 416 A G 500 A C 501 A G 502 A C 503 A C 504 A C 508 A A 509 A C 522 A A 523 A G 524 A C 536 A G 537 A G 540 A G 541 A G 542 A G 544 A C 545 A G 550 A U 551 A A 611 A C 612 A G 630 A 11 2.51 2.51 114.8 -0.67 -0.70 7.4 71 4 0 0 1 0 1 0  UNX 168 U 5 A A 120 A C 121 A G 122 A U 164 A C 165 A G 238 A U 239 A C 240 A C 241 A U 252 A U 253 A C 267 A C 268 A C 277 A G 278 A G 281 A A 282 A C 283 A G 292 A G 293 A G 297 A G 299 A A 300 A G 301 A G 302 A C 314 A A 315 A G 316 A G 319 A C 320 A C 328 A A 329 A G 333 A C 334 A C 335 A G 348 A A 349 A G 350 A G 351 A G 610 A A 611 A G 630 A G 631 A A 632 A G 1435 A G 1461 A 12 2.94 2.94 117.5 -0.68 -0.74 7.9 70 3 1 0 1 0 1 0  UNX 62 UNX 124 UNX 168 U 5 A U 14 A G 238 A U 239 A C 240 A C 241 A C 242 A A 243 A G 281 A G 292 A G 293 A G 297 A G 299 A A 300 A G 301 A G 302 A G 527 A A 573 A A 574 A G 610 A A 611 A G 630 A G 631 A A 632 A C 883 A U 884 A G 885 A G 886 A G 887 A G 888 A A 889 A G 890 A G 906 A A 907 A A 908 A A 915 A G 916 A C 1403 A C 1404 A C 1490 A G 1491 A U 1510 A 13 2.99 2.99 119.6 -0.53 -0.80 5.3 76 2 1 0 0 0 0 0  UNX 6 UNX 13 UNX 39 UNX 62 U 14 A G 527 A U 652 A A 653 A G 654 A A 655 A U 723 A G 724 A G 725 A G 727 A A 728 A A 729 A G 731 A U 743 A C 744 A C 745 A A 746 A C 748 A C 749 A G 818 A C 822 A G 823 A C 824 A G 851 A G 852 A G 853 A G 854 A G 855 A C 856 A C 866 A G 867 A C 868 A G 886 A G 887 A A 915 A G 916 A G 917 A A 918 A A 919 A U 1393 A A 1394 A C 1403 A C 1404 A C 1490 A G 1491 A C 1509 A U 1510 A U 1528 A G 1529 A G 1530 A 14 2.99 3.07 120.7 -0.69 -0.75 8.5 81 3 1 0 1 0 0 0  UNX 84 UNX 141 UNX 158 UNX 180 U 125 A G 126 A G 127 A G 128 A G 129 A i:A U 129 A C 131 A C 132 A U 133 A A 134 A C 135 A C 136 A C 137 A G 138 A G 139 A A 140 A A 141 A C 218 A C 219 A C 221 A U 222 A U 223 A C 224 A C 225 A G 226 A G 227 A A 228 A U 229 A G 230 A G 231 A A 300 A A 460 A A 602 A U 603 A G 604 A U 605 A G 606 A A 608 A G 628 A G 629 A G 630 A G 631 A 15 2.59 2.59 131.4 -0.50 -0.71 5.5 68 2 0 0 1 0 1 0  UNX 168 UNX 177 U 5 A G 238 A U 239 A C 240 A C 241 A C 242 A A 243 A U 244 A G 281 A G 292 A G 293 A G 297 A G 299 A A 300 A G 301 A G 302 A G 610 A A 611 A G 630 A G 631 A A 632 A G 668 A U 669 A G 670 A G 671 A U 672 A G 714 A A 715 A C 732 A A 733 A G 760 A G 761 A C 762 A G 763 A C 764 A G 765 A A 766 A A 767 A G 774 A C 806 A A 807 A C 808 A G 809 A C 810 A C 811 A C 812 A C 882 A G 895 A C 896 A C 897 A G 903 A C 904 A U 905 A G 906 A 16 2.24 2.24 132.4 -0.89 -0.70 8.8 73 4 0 2 2 0 0 0  UNX 111 U 118 A A 119 A A 120 A G 122 A U 164 A C 165 A C 245 A G 247 A C 248 A U 249 A A 250 A U 252 A C 267 A C 268 A A 274 A G 275 A G 276 A G 284 A C 314 A A 315 A G 316 A G 319 A C 320 A C 328 A A 329 A G 333 A C 334 A C 335 A G 348 A A 349 A G 350 A G 351 A C 1426 A G 1435 A G 1476 A 17 2.32 2.33 136.3 -1.39 -0.66 14.6 74 6 0 2 2 0 0 0  UNX 111 UNX 112 UNX 168 U 5 A A 119 A G 238 A U 239 A C 240 A U 244 A C 245 A G 247 A C 248 A U 249 A A 274 A G 275 A G 276 A G 285 A G 286 A U 287 A C 290 A C 291 A G 292 A G 293 A U 294 A G 297 A G 299 A A 300 A G 301 A G 302 A A 303 A U 304 A G 610 A A 611 A G 630 A G 894 A G 895 A A 908 A A 909 A G 1476 A C 1477 A C 1478 A C 1479 A 18 2.02 2.02 138.7 -0.96 -0.69 9.7 73 4 0 2 2 0 0 0  UNX 111 UNX 177 U 244 A C 245 A A 246 A G 247 A C 248 A U 249 A A 274 A G 275 A G 276 A G 668 A U 669 A G 670 A G 671 A U 672 A G 714 A A 715 A C 732 A A 733 A G 761 A C 762 A G 763 A C 764 A G 765 A A 766 A A 767 A G 774 A C 806 A A 807 A C 808 A G 809 A C 810 A C 811 A C 812 A G 894 A G 895 A C 896 A C 897 A G 903 A C 904 A G 1476 A C 1477 A 19 2.29 2.17 139.9 -1.22 -0.70 13.5 74 6 1 2 2 0 0 0  UNX 62 UNX 111 UNX 124 U 14 A C 242 A U 244 A C 245 A G 247 A C 248 A U 249 A A 274 A G 275 A G 276 A G 285 A G 286 A G 527 A A 573 A A 574 A U 884 A G 885 A G 886 A G 887 A G 888 A A 889 A G 890 A G 894 A G 895 A A 907 A A 908 A A 915 A G 916 A C 1403 A C 1404 A G 1476 A C 1477 A C 1478 A C 1479 A C 1490 A G 1491 A U 1510 A 20 2.62 2.62 154.0 -0.61 -0.72 6.5 67 2 1 0 1 1 0 0  UNX 62 UNX 124 U 14 A G 117 A U 118 A A 119 A A 120 A G 122 A U 164 A C 165 A C 242 A U 244 A U 252 A C 267 A C 268 A G 284 A G 286 A U 287 A C 314 A A 315 A G 316 A G 318 A G 319 A C 320 A C 328 A A 329 A G 333 A C 334 A C 335 A G 348 A A 349 A G 350 A G 351 A G 527 A A 573 A A 574 A U 884 A G 885 A G 886 A G 887 A G 888 A A 889 A G 890 A A 907 A A 908 A A 915 A G 916 A C 1403 A C 1404 A G 1423 A C 1424 A U 1425 A C 1426 A G 1435 A G 1461 A C 1478 A C 1479 A C 1490 A G 1491 A U 1510 A 21 1.60 1.69 155.2 -1.30 -0.73 15.3 74 7 4 1 0 1 1 0  UNX 6 UNX 11 UNX 13 UNX 67 U 5 A G 299 A A 300 A U 565 A G 566 A G 567 A G 568 A C 569 A G 630 A U 723 A G 724 A G 725 A G 727 A A 729 A G 731 A A 780 A A 781 A C 783 A C 784 A G 785 A A 792 A U 793 A A 794 A C 795 A C 796 A C 797 A G 798 A G 818 A G 821 A C 822 A G 823 A C 824 A G 854 A G 855 A U 871 A A 872 A A 873 A G 874 A C 875 A G 876 A C 877 A A 1507 A G 1517 A C 1527 A U 1528 A G 1530 A A 1531 A A 1534 A 22 2.70 3.98 161.7 -1.04 -0.61 13.3 75 5 4 2 2 2 3 0  UNX 6 UNX 13 UNX 67 U 5 A G 299 A A 300 A U 565 A G 566 A G 567 A G 568 A C 569 A G 630 A U 677 A U 678 A C 679 A C 680 A C 681 A G 682 A G 683 A A 684 A G 685 A G 690 A G 691 A C 699 A G 700 A A 702 A G 703 A A 704 A U 705 A G 718 A C 719 A A 722 A U 723 A G 724 A G 725 A G 727 A A 729 A G 731 A G 799 A G 818 A G 821 A C 822 A G 823 A C 824 A G 854 A G 855 A U 871 A A 872 A A 873 A G 874 A C 875 A G 876 A C 877 A C 1527 A U 1528 A 23 2.48 2.48 162.1 -0.66 -0.77 6.6 74 4 0 0 0 0 0 0  UNX 177 A 120 A C 121 A G 122 A U 164 A C 165 A C 240 A C 241 A C 242 A A 243 A U 244 A U 252 A U 253 A C 267 A C 268 A C 277 A G 278 A G 281 A A 282 A C 283 A C 314 A A 315 A G 316 A G 319 A C 320 A C 328 A A 329 A G 333 A C 334 A C 335 A G 348 A A 349 A G 350 A G 351 A G 668 A U 669 A G 670 A G 671 A U 672 A G 714 A A 715 A C 732 A A 733 A G 760 A G 761 A C 762 A G 763 A C 764 A G 765 A A 766 A A 767 A G 774 A C 806 A A 807 A C 808 A G 809 A C 810 A C 811 A C 812 A C 882 A G 895 A C 896 A C 897 A G 903 A C 904 A U 905 A G 906 A G 1435 A G 1461 A 24 2.26 2.26 165.1 -0.77 -0.77 8.2 76 5 1 0 0 0 0 0  UNX 9 A 120 A C 121 A G 122 A U 164 A C 165 A C 240 A C 241 A C 242 A A 243 A U 244 A U 252 A U 253 A C 267 A C 268 A C 277 A G 278 A G 281 A A 282 A C 283 A C 314 A A 315 A G 316 A G 319 A C 320 A C 328 A A 329 A G 333 A C 334 A C 335 A G 348 A A 349 A G 350 A G 351 A G 576 A G 577 A C 578 A G 579 A U 580 A A 653 A G 654 A A 655 A C 656 A U 743 A C 744 A C 745 A A 746 A C 748 A C 749 A U 757 A G 758 A A 759 A G 760 A G 761 A C 762 A C 822 A G 823 A C 824 A G 851 A G 852 A C 882 A C 904 A U 905 A G 906 A G 1435 A G 1461 A 25 1.98 2.01 170.7 -0.63 -0.77 6.8 83 3 1 2 1 0 0 0  UNX 139 UNX 166 U 24 A C 25 A A 26 A A 50 A G 52 A G 117 A U 118 A A 119 A A 120 A G 122 A U 164 A C 165 A U 252 A G 265 A C 267 A C 268 A G 284 A G 286 A U 287 A A 288 A C 314 A A 315 A G 316 A G 318 A G 319 A C 320 A C 328 A A 329 A G 333 A C 334 A C 335 A G 348 A A 349 A G 350 A G 351 A A 415 A G 416 A G 500 A C 501 A G 502 A C 503 A C 504 A C 508 A C 522 A A 523 A G 524 A C 536 A G 537 A G 540 A G 541 A G 542 A U 551 A U 552 A C 554 A C 555 A G 557 A G 1423 A C 1424 A U 1425 A C 1426 A G 1435 A G 1461 A 26 2.06 2.06 166.3 -0.85 -0.73 8.1 73 4 0 2 2 0 0 0  UNX 111 UNX 141 UNX 158 UNX 180 U 118 A A 119 A A 120 A G 122 A C 123 A G 124 A G 127 A G 128 A G 129 A i:A U 129 A C 131 A C 132 A U 133 A A 134 A C 135 A C 136 A C 137 A G 138 A G 139 A A 140 A A 141 A C 218 A C 219 A C 221 A U 222 A U 223 A C 224 A C 225 A G 226 A G 227 A A 228 A U 229 A G 230 A G 231 A G 232 A C 233 A C 245 A G 247 A C 248 A U 249 A A 250 A U 252 A C 267 A C 268 A A 274 A G 275 A G 276 A G 284 A C 312 A A 313 A C 314 A G 319 A C 320 A C 328 A A 460 A C 1426 A G 1476 A 27 1.98 2.03 172.1 -1.22 -0.72 12.8 77 9 1 4 2 1 0 0  UNX 111 UNX 166 U 24 A C 25 A A 26 A U 244 A C 245 A G 247 A C 248 A U 249 A A 274 A G 275 A G 276 A G 285 A G 286 A U 287 A A 415 A G 416 A G 500 A C 501 A G 502 A C 503 A C 504 A C 508 A C 522 A A 523 A G 524 A C 536 A G 537 A G 540 A G 541 A G 542 A U 551 A U 552 A C 554 A C 555 A G 557 A G 894 A G 895 A A 908 A A 909 A G 1476 A C 1477 A C 1478 A C 1479 A 28 2.33 2.32 171.1 -1.08 -0.71 10.0 77 5 0 3 2 0 0 0  UNX 111 G 52 A A 53 A C 54 A A 55 A U 56 A G 57 A C 58 A A 59 A G 61 A U 62 A C 99 A A 101 A A 116 A G 117 A U 118 A C 245 A G 247 A C 248 A U 249 A A 250 A U 252 A A 274 A G 275 A G 276 A G 284 A G 316 A G 317 A G 318 A G 319 A A 338 A C 339 A U 340 A C 341 A A 349 A G 350 A U 359 A U 368 A C 369 A C 370 A G 371 A C 372 A C 386 A U 387 A G 388 A C 1424 A U 1425 A C 1426 A G 1476 A 29 2.29 2.37 182.2 -0.63 -0.59 9.7 79 5 5 1 3 1 2 0  UNX 45 UNX 87 UNX 158 G 128 A G 129 A i:A U 129 A C 132 A U 133 A A 134 A C 135 A C 136 A C 137 A G 138 A G 139 A A 140 A A 141 A G 190 A i:G U 190 A i:D C 190 A i:C U 190 A i:E C 218 A C 219 A C 221 A U 222 A U 223 A C 224 A C 225 A G 226 A G 227 A A 460 A G 593 A G 594 A G 595 A C 596 A U 636 A G 637 A C 647 A A 648 A G 649 A G 650 A C 651 A U 652 A A 653 A C 749 A G 750 A U 751 A G 752 A 30 2.01 2.01 198.2 -1.02 -0.75 11.6 82 7 4 2 1 0 0 0  UNX 80 UNX 84 UNX 141 UNX 158 UNX 166 UNX 180 A 26 A G 27 A G 28 A G 29 A U 125 A G 126 A G 127 A G 128 A G 129 A i:A U 129 A C 131 A C 132 A U 133 A A 134 A C 135 A C 136 A C 137 A G 138 A G 139 A A 140 A A 141 A C 218 A C 219 A C 221 A U 222 A U 223 A C 224 A C 225 A G 226 A G 227 A A 228 A U 229 A G 230 A G 231 A C 295 A C 400 A A 415 A G 416 A A 460 A G 500 A C 501 A G 502 A C 503 A C 504 A C 508 A A 509 A C 522 A A 523 A G 524 A C 536 A G 537 A G 540 A G 541 A G 542 A G 544 A C 545 A G 550 A U 551 A U 605 A G 606 A A 608 A A 609 A G 610 A A 611 A C 612 A C 613 A A 614 A A 622 A C 623 A C 624 A G 625 A U 626 A G 627 A G 628 A Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.