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PDBsum entry 1ffv

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Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 1ffv calculated with MOLE 2.0 PDB id
1ffv
Pores calculated on whole structure Pores calculated excluding ligands

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6 pores, coloured by radius 7 pores, coloured by radius 7 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.36 2.29 27.4 -2.49 -0.75 31.2 76 5 4 0 0 1 1 0  
2 2.57 2.58 42.4 -1.21 -0.53 15.5 72 5 1 0 3 1 2 0  
3 1.34 1.39 53.1 -1.37 -0.46 22.3 84 10 5 3 4 0 0 0  
4 1.32 1.38 59.2 -1.14 -0.26 16.4 83 8 4 4 4 2 2 0  
5 1.53 1.91 30.1 -1.19 -0.42 12.6 75 2 2 2 2 3 1 0  
6 1.22 1.24 40.8 -0.50 -0.23 12.7 84 5 2 2 9 2 0 0  FAD 1922 C
7 1.07 1.38 47.5 -1.72 -0.22 23.4 75 4 4 1 2 5 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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