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PDBsum entry 1eiy

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Top Page protein dna_rna Protein-protein interface(s) pores links
Pore analysis for: 1eiy calculated with MOLE 2.0 PDB id
1eiy
Pores calculated on whole structure Pores calculated excluding ligands

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5 pores, coloured by radius 5 pores, coloured by radius 5 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 2.03 2.16 32.4 -2.10 -0.51 23.1 76 3 1 1 1 2 0 0  G 1 C C 2 C C 72 C A 73 C C 74 C C 75 C
2 3.19 3.19 37.0 -1.64 -0.72 23.5 79 4 4 1 1 0 0 0  G 10 C C 11 C U 12 C C 13 C U 45 C G 46 C U 47 C
C 67 C U 68 C C 69 C G 70 C G 71 C C 72 C A 73 C
3 1.77 1.77 41.5 -0.87 -0.78 6.4 74 0 2 1 0 0 1 0  G 28 C C 29 C G 30 C A 31 C C 32 C U 33 C A 35 C
A 36 C A 37 C A 38 C U 39 C C 40 C
4 1.86 2.06 25.2 -0.43 -0.06 15.3 69 3 3 0 5 0 2 0  
5 1.75 1.75 62.2 -1.11 -0.17 25.9 74 4 3 1 6 0 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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