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PDBsum entry 1eiy

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Top Page protein dna_rna Protein-protein interface(s) tunnels links
Tunnel analysis for: 1eiy calculated with MOLE 2.0 PDB id
1eiy
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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5 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.18 2.64 16.7 3.04 0.78 1.3 76 0 1 0 9 1 0 0  
2 1.18 2.64 22.4 2.90 0.75 2.5 78 1 1 0 10 1 0 0  
3 1.27 2.16 18.3 1.58 0.16 2.8 86 0 1 1 9 0 0 0  
4 1.15 2.31 18.1 0.91 0.25 7.0 67 2 1 1 6 1 1 0  
5 1.16 1.42 17.6 0.45 0.02 10.4 72 2 1 0 2 1 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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