PDBsum entry 1ds8 Go to PDB code:  Pore analysis for: 1ds8 calculated with MOLE 2.0 PDB id 1ds8 Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   4 pores, coloured by radius 10 pores, coloured by radius 10 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.80 2.45 32.5 -0.16 0.56 17.2 76 4 0 3 5 5 0 0  BCL 2001 R BCL 2002 R BCL 2003 S BPH 2005 S LDA 2012 S 2 1.21 2.55 32.6 -1.42 -0.42 15.1 88 5 1 5 3 1 1 0  CD 2010 T 3 2.71 4.33 33.5 0.78 0.83 11.8 73 4 0 1 8 5 0 0  BCL 2001 R BCL 2002 R BCL 2004 R BCL 2003 S BPH 2005 S LDA 2012 S 4 1.14 1.85 52.2 -1.96 -0.40 25.4 81 7 8 0 3 0 4 0  CD 2010 T 5 1.19 1.36 59.3 -2.16 -0.59 20.9 84 6 7 5 2 0 3 0   6 1.19 1.81 65.5 -0.04 0.25 17.3 75 4 6 1 11 6 3 0  BCL 2001 R U10 2009 R BCL 2003 S BPH 2005 S CD 2010 T 7 1.42 1.41 67.2 0.12 0.16 12.6 72 5 6 0 11 6 2 0  BCL 2001 R U10 2009 R BCL 2003 S BPH 2005 S 8 2.75 4.16 33.5 0.83 0.85 11.1 73 4 0 1 8 5 0 0  BCL 1001 L BCL 1002 L BCL 1004 L BCL 1003 M BPH 1005 M LDA 1014 M 9 1.16 1.74 49.5 -2.07 -0.44 26.9 80 6 9 0 2 0 4 0   10 1.42 1.54 67.0 0.05 0.15 13.6 73 5 6 0 11 6 2 0  BCL 1001 L U10 1009 L BCL 1003 M BPH 1005 M Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.