PDBsum entry 1ds8 Go to PDB code:  Tunnel analysis for: 1ds8 calculated with MOLE 2.0 PDB id 1ds8 Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   10 tunnels, coloured by tunnel radius 3 tunnels, coloured by tunnel radius 3 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.39 1.41 39.0 -1.04 -0.48 7.9 87 3 2 7 6 1 1 0   2 1.16 1.40 74.8 -1.55 -0.52 16.8 81 5 8 8 9 1 3 0   3 1.44 1.57 122.1 -0.03 0.15 9.3 77 7 6 9 22 12 2 0  BCL 1001 L BCL 1002 L BCL 1004 L BPH 1006 L U10 1009 L BCL 1003 M BPH 1005 M LDA 1014 M Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.