PDBsum entry 1d4c Go to PDB code:  Pore analysis for: 1d4c calculated with MOLE 2.0 PDB id 1d4c Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   10 pores, coloured by radius 13 pores, coloured by radius 13 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.64 1.65 35.6 0.65 0.35 14.5 73 6 1 1 7 1 0 4  HEC 602 B HEC 603 B HEC 604 B 2 2.04 2.37 40.8 -0.99 0.03 16.7 76 5 2 3 1 3 2 1  HEC 604 D 3 1.68 1.66 41.9 0.30 0.27 16.8 74 6 2 1 6 0 0 5  HEC 602 B HEC 603 B HEC 604 B 4 2.92 2.92 42.4 -2.22 -0.56 25.7 85 5 2 2 3 0 1 0   5 2.37 2.37 49.3 -1.37 -0.46 17.2 89 6 1 2 5 0 0 0  HEC 601 B 6 1.18 1.18 62.9 -0.77 -0.36 15.1 83 7 4 1 10 2 0 0  FAD 900 D SO4 914 D 7 1.19 1.17 66.9 -0.42 -0.26 13.1 81 7 3 1 11 3 0 0  HEC 601 D FAD 900 D 8 1.35 1.45 29.9 -0.01 0.22 17.0 74 4 3 0 4 1 1 2  HEC 602 A HEC 604 A 9 1.36 1.69 60.1 -0.33 -0.36 12.3 80 5 4 2 5 0 0 1  HEC 602 C 10 1.63 1.83 68.0 -0.58 -0.23 16.1 76 8 2 2 5 0 1 2  HEC 602 C HEC 604 C 11 1.36 1.96 68.1 -0.37 -0.24 13.1 79 7 3 2 6 1 1 1  HEC 602 C 12 1.42 1.72 120.9 -1.37 -0.41 19.7 81 9 10 7 10 3 2 0   13 1.43 1.78 129.2 -0.90 -0.26 19.9 78 12 10 4 10 3 1 2  HEC 602 C HEC 603 C HEC 604 C Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.