PDBsum entry 1d4c Go to PDB code:  Tunnel analysis for: 1d4c calculated with MOLE 2.0 PDB id 1d4c Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   10 tunnels, coloured by tunnel radius 7 tunnels, coloured by tunnel radius 7 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.48 1.55 16.0 -1.00 -0.53 13.2 88 2 1 4 3 0 0 0   2 1.16 1.45 15.3 1.58 0.22 4.3 87 1 1 0 6 0 0 0   3 1.19 1.26 24.4 2.10 0.68 1.9 84 1 0 1 9 2 0 0   4 1.19 1.27 19.9 0.48 -0.25 7.3 89 1 1 0 5 1 0 0   5 1.24 2.54 16.6 2.44 0.94 5.0 78 0 1 1 7 3 0 0   6 1.47 2.05 15.3 0.18 0.34 14.1 81 2 1 1 3 2 0 0   7 1.46 2.05 15.7 0.81 0.32 12.1 81 1 1 1 3 2 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.