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PDBsum entry 1ct9
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Tunnel analysis for: 1ct9 calculated with  MOLE 2.0
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PDB id
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1ct9
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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10 tunnels,
coloured by tunnel radius |
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9 tunnels,
coloured by
tunnel radius
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9 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.22 |
1.31 |
36.7 |
-1.01 |
-0.36 |
13.6 |
84 |
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4 |
2 |
3 |
4 |
1 |
0 |
0 |
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GLN 1113 B
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2 |
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1.10 |
1.10 |
51.2 |
-0.47 |
-0.23 |
14.4 |
81 |
2 |
7 |
3 |
10 |
2 |
0 |
1 |
AMP 1107 B IUM 1108 B IUM 1109 B
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3 |
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1.28 |
1.38 |
70.1 |
-1.11 |
-0.37 |
16.3 |
83 |
6 |
5 |
7 |
7 |
2 |
0 |
0 |
GLN 1113 B
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4 |
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1.39 |
1.48 |
18.8 |
-0.72 |
-0.24 |
21.3 |
86 |
3 |
3 |
2 |
4 |
0 |
0 |
0 |
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5 |
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1.42 |
1.49 |
20.5 |
-0.09 |
-0.21 |
11.7 |
87 |
1 |
3 |
3 |
3 |
1 |
0 |
0 |
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6 |
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1.38 |
1.47 |
21.4 |
-0.60 |
-0.16 |
22.6 |
86 |
5 |
3 |
2 |
3 |
0 |
0 |
0 |
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7 |
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1.36 |
1.46 |
34.2 |
-0.99 |
-0.26 |
21.8 |
87 |
3 |
4 |
4 |
4 |
0 |
0 |
0 |
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8 |
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1.25 |
2.60 |
17.5 |
-0.05 |
-0.09 |
13.5 |
84 |
2 |
1 |
0 |
2 |
1 |
0 |
0 |
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9 |
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1.10 |
1.77 |
17.8 |
1.06 |
0.26 |
5.3 |
74 |
0 |
1 |
0 |
7 |
3 |
0 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program