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PDBsum entry 1ct9

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Top Page protein ligands metals Protein-protein interface(s) pores links
Pore analysis for: 1ct9 calculated with MOLE 2.0 PDB id
1ct9
Pores calculated on whole structure Pores calculated excluding ligands

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4 pores, coloured by radius 5 pores, coloured by radius 5 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.15 1.53 69.7 -0.89 -0.23 16.6 82 5 7 5 11 3 0 1  AMP 1107 B IUM 1108 B IUM 1109 B GLN 1113 B
2 2.50 3.03 30.6 -1.46 -0.29 17.8 87 4 1 2 3 1 0 0  
3 2.02 2.02 27.6 -1.73 -0.45 21.8 79 3 2 2 3 2 1 0  AMP 1100 A
4 1.53 1.54 34.9 -1.35 -0.22 13.3 75 2 3 0 2 3 1 1  
5 2.01 2.02 40.2 -1.64 -0.23 19.8 78 4 3 2 3 3 1 0  AMP 1100 A

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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