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PDBsum entry 1b23
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Pore analysis for: 1b23 calculated with MOLE 2.0
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PDB id
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1b23
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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11 pores,
coloured by radius |
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11 pores,
coloured by radius
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11 pores,
coloured as in list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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2.94 |
2.93 |
32.5 |
-1.01 |
-0.82 |
12.8 |
78 |
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1 |
3 |
0 |
1 |
0 |
1 |
0 |
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G 1 R C 3 R G 4 R C 5 R C 62 R G 63 R G 64 R A 65 R A 66 R C 67 R G 68 R C 69 R
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2 |
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3.30 |
3.55 |
34.9 |
-0.83 |
-0.82 |
10.1 |
76 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
G 1 R C 3 R G 4 R C 5 R G 6 R U 7 R C 11 R A 12 R A 13 R A 14 R G 15 R U 45 R C 61 R C 62 R G 63 R G 64 R A 65 R A 66 R C 67 R G 68 R C 69 R
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3 |
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2.55 |
2.55 |
35.1 |
-0.45 |
-0.80 |
4.2 |
86 |
0 |
1 |
0 |
0 |
0 |
0 |
0 |
G 4 R C 5 R G 6 R U 7 R U 49 R C 50 R C 51 R G 52 R A 58 R C 59 R U 60 R C 61 R C 62 R G 63 R G 64 R
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4 |
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1.68 |
1.68 |
38.8 |
-0.40 |
-0.80 |
3.4 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
A 9 R A 22 R U 23 R G 24 R U 25 R A 26 R G 27 R C 28 R G 30 R A 31 R U 33 R A 36 R MIA 37 R A 38 R C 40 R C 41 R G 42 R U 43 R C 44 R A 46 R G 48 R C 50 R C 51 R G 52 R A 58 R C 59 R
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5 |
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1.15 |
1.27 |
42.2 |
-0.80 |
-0.62 |
14.0 |
81 |
3 |
3 |
0 |
3 |
0 |
0 |
0 |
G 1 R C 3 R G 4 R C 5 R U 49 R C 62 R G 63 R G 64 R A 65 R A 66 R C 67 R C 69 R
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6 |
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2.47 |
2.47 |
51.1 |
-0.40 |
-0.80 |
3.4 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
G 6 R U 7 R C 11 R A 12 R A 13 R A 14 R G 15 R C 16 R U 49 R C 50 R C 51 R G 52 R A 58 R C 59 R U 60 R C 61 R C 67 R G 68 R
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7 |
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2.55 |
2.55 |
51.4 |
-0.72 |
-0.81 |
8.5 |
76 |
1 |
2 |
0 |
1 |
0 |
1 |
0 |
G 1 R C 3 R G 4 R C 5 R G 6 R U 7 R U 49 R C 50 R C 51 R G 52 R A 58 R C 59 R U 60 R C 61 R C 62 R G 63 R G 64 R A 65 R A 66 R C 67 R G 68 R C 69 R
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8 |
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1.17 |
1.30 |
61.1 |
-0.63 |
-0.67 |
10.0 |
80 |
3 |
2 |
0 |
3 |
0 |
0 |
0 |
G 1 R C 3 R G 4 R C 5 R G 6 R U 7 R U 49 R C 50 R C 51 R G 52 R A 58 R C 59 R U 60 R C 61 R C 62 R G 63 R G 64 R A 65 R A 66 R C 67 R C 69 R
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9 |
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1.88 |
2.20 |
70.1 |
-0.67 |
-0.76 |
8.4 |
80 |
2 |
2 |
0 |
3 |
0 |
0 |
0 |
G 1 R C 3 R G 4 R C 5 R G 6 R U 7 R C 11 R A 12 R A 13 R A 14 R G 15 R U 45 R U 49 R C 61 R C 62 R G 63 R G 64 R A 65 R A 66 R C 67 R G 68 R C 69 R
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10 |
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1.18 |
1.45 |
89.7 |
-0.68 |
-0.43 |
10.8 |
72 |
3 |
3 |
1 |
3 |
2 |
1 |
0 |
G 4 R C 5 R G 6 R U 7 R C 11 R A 12 R A 13 R A 14 R G 15 R C 61 R C 62 R G 63 R G 64 R C 67 R G 68 R
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11 |
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1.18 |
1.18 |
94.8 |
-1.44 |
-0.59 |
19.1 |
80 |
8 |
5 |
2 |
2 |
2 |
1 |
0 |
G 1 R G 68 R C 74 R C 75 R A 76 R
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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