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PDBsum entry 1b23

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Pore analysis for: 1b23 calculated with MOLE 2.0 PDB id
1b23
Pores calculated on whole structure Pores calculated excluding ligands

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11 pores, coloured by radius 11 pores, coloured by radius 11 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 2.94 2.93 32.5 -1.01 -0.82 12.8 78 1 3 0 1 0 1 0  G 1 R C 3 R G 4 R C 5 R C 62 R G 63 R G 64 R A 65
R A 66 R C 67 R G 68 R C 69 R
2 3.30 3.55 34.9 -0.83 -0.82 10.1 76 0 0 0 0 0 0 0  G 1 R C 3 R G 4 R C 5 R G 6 R U 7 R C 11 R A 12 R
A 13 R A 14 R G 15 R U 45 R C 61 R C 62 R G 63 R
G 64 R A 65 R A 66 R C 67 R G 68 R C 69 R
3 2.55 2.55 35.1 -0.45 -0.80 4.2 86 0 1 0 0 0 0 0  G 4 R C 5 R G 6 R U 7 R U 49 R C 50 R C 51 R G 52
R A 58 R C 59 R U 60 R C 61 R C 62 R G 63 R G 64 R
4 1.68 1.68 38.8 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  A 9 R A 22 R U 23 R G 24 R U 25 R A 26 R G 27 R C
28 R G 30 R A 31 R U 33 R A 36 R MIA 37 R A 38 R
C 40 R C 41 R G 42 R U 43 R C 44 R A 46 R G 48 R
C 50 R C 51 R G 52 R A 58 R C 59 R
5 1.15 1.27 42.2 -0.80 -0.62 14.0 81 3 3 0 3 0 0 0  G 1 R C 3 R G 4 R C 5 R U 49 R C 62 R G 63 R G 64
R A 65 R A 66 R C 67 R C 69 R
6 2.47 2.47 51.1 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  G 6 R U 7 R C 11 R A 12 R A 13 R A 14 R G 15 R C
16 R U 49 R C 50 R C 51 R G 52 R A 58 R C 59 R U
60 R C 61 R C 67 R G 68 R
7 2.55 2.55 51.4 -0.72 -0.81 8.5 76 1 2 0 1 0 1 0  G 1 R C 3 R G 4 R C 5 R G 6 R U 7 R U 49 R C 50 R
C 51 R G 52 R A 58 R C 59 R U 60 R C 61 R C 62 R
G 63 R G 64 R A 65 R A 66 R C 67 R G 68 R C 69 R
8 1.17 1.30 61.1 -0.63 -0.67 10.0 80 3 2 0 3 0 0 0  G 1 R C 3 R G 4 R C 5 R G 6 R U 7 R U 49 R C 50 R
C 51 R G 52 R A 58 R C 59 R U 60 R C 61 R C 62 R
G 63 R G 64 R A 65 R A 66 R C 67 R C 69 R
9 1.88 2.20 70.1 -0.67 -0.76 8.4 80 2 2 0 3 0 0 0  G 1 R C 3 R G 4 R C 5 R G 6 R U 7 R C 11 R A 12 R
A 13 R A 14 R G 15 R U 45 R U 49 R C 61 R C 62 R
G 63 R G 64 R A 65 R A 66 R C 67 R G 68 R C 69 R
10 1.18 1.45 89.7 -0.68 -0.43 10.8 72 3 3 1 3 2 1 0  G 4 R C 5 R G 6 R U 7 R C 11 R A 12 R A 13 R A 14
R G 15 R C 61 R C 62 R G 63 R G 64 R C 67 R G 68 R
11 1.18 1.18 94.8 -1.44 -0.59 19.1 80 8 5 2 2 2 1 0  G 1 R G 68 R C 74 R C 75 R A 76 R

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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