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PDBsum entry 1aql
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Pore analysis for: 1aql calculated with  MOLE 2.0
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PDB id
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1aql
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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8 pores,
coloured by radius |
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10 pores,
coloured by radius
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10 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.24 |
2.23 |
25.7 |
0.14 |
0.07 |
13.8 |
79 |
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2 |
2 |
0 |
6 |
1 |
0 |
0 |
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2 |
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2.64 |
2.85 |
30.6 |
-0.75 |
-0.34 |
8.7 |
86 |
3 |
0 |
5 |
3 |
1 |
1 |
0 |
TCH 601 B
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3 |
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2.36 |
2.46 |
47.6 |
0.49 |
0.20 |
1.7 |
82 |
0 |
1 |
4 |
7 |
4 |
1 |
0 |
TCH 601 B
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4 |
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2.37 |
2.46 |
51.1 |
-0.40 |
0.08 |
7.8 |
82 |
3 |
1 |
4 |
5 |
4 |
0 |
0 |
TCH 601 B
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5 |
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3.01 |
3.04 |
68.5 |
-1.14 |
-0.30 |
16.9 |
81 |
6 |
4 |
5 |
6 |
2 |
3 |
0 |
TCH 601 A
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6 |
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2.62 |
2.86 |
77.7 |
-0.85 |
-0.26 |
11.6 |
84 |
4 |
3 |
5 |
5 |
2 |
1 |
0 |
TCH 601 B
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7 |
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2.38 |
2.47 |
80.1 |
-0.03 |
0.02 |
9.4 |
82 |
2 |
5 |
5 |
10 |
5 |
1 |
0 |
TCH 601 A
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8 |
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2.92 |
2.97 |
87.1 |
0.49 |
0.17 |
8.2 |
81 |
2 |
4 |
6 |
14 |
5 |
2 |
0 |
TCH 601 A TCH 601 B
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9 |
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1.29 |
2.13 |
107.1 |
-1.60 |
-0.44 |
17.7 |
79 |
2 |
6 |
5 |
2 |
4 |
3 |
0 |
NAG 600 A
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10 |
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1.29 |
1.95 |
151.8 |
-0.78 |
-0.22 |
14.7 |
79 |
6 |
8 |
10 |
14 |
7 |
3 |
0 |
TCH 601 A TCH 602 B
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program