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Ligand clusters for UniProt code V7II86
Ligand clusters for V7II86: Threonine--tRNA ligase from Salmonella enterica subsp. enterica serovar Cubana str. 76814
4 ligand clusters
Cluster 1.
5 ligand types
9 ligands
Cluster 2.
1 ligand type
1 ligand
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
1 ligand type
1 ligand
Representative protein: 6l2qA
Structures
PDB
Schematic diagram
6l2q
A
7cbi
A
6l2p
A
7cbh
A
7cbg
A
Cluster 1 contains 5 ligand types
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Ligand
Description
_Zn
1. Metal:
_ZN × 5
PDB codes:
6l2p
(A),
6l2q
(A),
7cbg
(A),
7cbh
(A),
7cbi
(A).
2. Ligand:
E4O × 1
(2s,3r)-2-Azanyl-N-[(E)-4-[6,7-Bis(chloranyl)-4- Oxidanylidene-Quinazolin-3-Yl]but-2-Enyl]-3-
Oxidanyl- Butanamide
PDB code:
6l2q
(A).
3. Ligand:
FQL × 1
(2s,3r)-N-[(E)-4-[6,7-Bis(chloranyl)-4-Oxidanylidene- Quinazolin-3-Yl]but-2-Enyl]-2-(Methylamino)-
3- Oxidanyl-Butanamide
PDB code:
7cbg
(A).
4. Ligand:
FQR × 1
[(E)-4-(7-Bromanyl-6-Chloranyl-4-Oxidanylidene- Quinazolin-3-Yl)but-2-Enyl] (2s,3r)-2-Azanyl-3-
Oxidanyl-Butanoate
PDB code:
7cbh
(A).
5. Ligand:
FQU × 1
5-(7-Bromanyl-6-Chloranyl-4-Oxidanylidene-Quinazolin-3- Yl)pentyl (2~{s},3~{r})-2-Azanyl-3-
Oxidanyl-Butanoate
PDB code:
7cbi
(A).
Cluster 2 contains 1 ligand type
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Ligand
Description
1. Ligand:
GOL × 1
glycerin
Glycerol
PDB code:
7cbi
(A).
Cluster 3 contains 1 ligand type
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Ligand
Description
1. Ligand:
EDO × 1
1,2-Ethanediol
PDB code:
6l2q
(A).
Cluster 4 contains 1 ligand type
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Ligand
Description
1. Ligand:
EDO × 1
1,2-Ethanediol
PDB code:
7cbi
(A).