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Ligand clusters for UniProt code V7II86

Ligand clusters for V7II86: Threonine--tRNA ligase from Salmonella enterica subsp. enterica serovar Cubana str. 76814

4 ligand clusters
Cluster 1.
5 ligand types
9 ligands
Cluster 2.
1 ligand type
1 ligand
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
1 ligand type
1 ligand
Representative protein: 6l2qA  
JSmol
 

Structures

PDB   Schematic diagram
6l2qA    
7cbiA    
6l2pA    
7cbhA    
7cbgA    

 

 Cluster 1 contains 5 ligand types

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Ligand Description

_Zn
 
1. Metal: _ZN × 5
PDB codes: 6l2p(A), 6l2q(A), 7cbg(A), 7cbh(A), 7cbi(A).


 
2. Ligand: E4O × 1
(2s,3r)-2-Azanyl-N-[(E)-4-[6,7-Bis(chloranyl)-4- Oxidanylidene-Quinazolin-3-Yl]but-2-Enyl]-3-
Oxidanyl- Butanamide
PDB code: 6l2q(A).


 
3. Ligand: FQL × 1
(2s,3r)-N-[(E)-4-[6,7-Bis(chloranyl)-4-Oxidanylidene- Quinazolin-3-Yl]but-2-Enyl]-2-(Methylamino)-
3- Oxidanyl-Butanamide
PDB code: 7cbg(A).


 
4. Ligand: FQR × 1
[(E)-4-(7-Bromanyl-6-Chloranyl-4-Oxidanylidene- Quinazolin-3-Yl)but-2-Enyl] (2s,3r)-2-Azanyl-3-
Oxidanyl-Butanoate
PDB code: 7cbh(A).


 
5. Ligand: FQU × 1
5-(7-Bromanyl-6-Chloranyl-4-Oxidanylidene-Quinazolin-3- Yl)pentyl (2~{s},3~{r})-2-Azanyl-3-
Oxidanyl-Butanoate
PDB code: 7cbi(A).

 

 Cluster 2 contains 1 ligand type

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Ligand Description


 
1. Ligand: GOL × 1
glycerin
Glycerol
PDB code: 7cbi(A).

 

 Cluster 3 contains 1 ligand type

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Ligand Description


 
1. Ligand: EDO × 1
1,2-Ethanediol
PDB code: 6l2q(A).

 

 Cluster 4 contains 1 ligand type

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Ligand Description


 
1. Ligand: EDO × 1
1,2-Ethanediol
PDB code: 7cbi(A).

 

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