Ligand clusters for UniProt code Q9Z4P9

Ligand clusters for Q9Z4P9: Alpha-1,6-mannanase from Bacillus circulans

		Top 6 (of 13) ligand clusters Cluster 1. 14 ligand types 19 ligands Cluster 2. 1 ligand type 1 ligand Cluster 3. 1 ligand type 1 ligand Cluster 4. 1 ligand type 2 ligands Cluster 5. 1 ligand type 2 ligands Cluster 6. 1 ligand type 1 ligand
Representative protein: 6zbxA

Structures

PDB		Schematic diagram
6zbxA
5n0fA
4d4cA
4d4bA
4d4aA
		more ...

Cluster 1 contains 14 ligand types

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Ligand		Description
		1. Ligand: EDO × 4 1,2-Ethanediol PDB codes: 4d4a(A), 4d4b(A), 4d4c(A).
		2. Ligand: MAN-MAN × 3 MAN=Alpha-D-Mannopyranose. PDB codes: 4boj(A), 6zbw(A), 7nl5(A).
		3. Ligand: 7K2 × 1 [(3s,4r,5r)-4,5-Dihydroxypiperidin-3-Yl]methyl 1-Thio- Alpha-D-Mannopyranoside PDB code: 5n0f(A).
		4. Ligand: 7K2-7K3 × 1 7K2=[(3s,4r,5r)-4,5-Dihydroxypiperidin-3-Yl]methyl 1-Thio- Alpha-D-Mannopyranoside, 7K3=1-Thio-Alpha-D-Mannopyranose. PDB code: 5m77(A).
		5. Ligand: BMA-MAN-MAN-MAN-MAN × 1 BMA=Beta-D-Mannopyranose, MAN=Alpha-D-Mannopyranose. PDB code: 5agd(A).
		6. Ligand: DMJ-MAN × 1 DMJ=1-Deoxymannojirimycin, MAN=Alpha-D-Mannopyranose. PDB code: 4d4c(A).
		7. Ligand: IFM-MAN × 1 IFM=5-Hydroxymethyl-3,4-Dihydroxypiperidine, MAN=Alpha-D-Mannopyranose. PDB code: 4d4d(A).
		8. Ligand: MAN × 1 Alpha-D-Mannopyranose PDB code: 5agd(A).
		9. Ligand: MSX-MAN × 1 MSX=Methyl 1,6-Dithio-Alpha-D-Mannopyranoside, MAN=Alpha-D-Mannopyranose. PDB code: 4d4b(A).
		10. Ligand: PBW × 1 (1~{s},4~{s},5~{r})-6-(Hydroxymethyl)cyclohexane-1,2,3, 4,5-Pentol PDB code: 6zbw(A).
		11. Ligand: PBW-M96-MAN × 1 PBW=(1~{s},4~{s},5~{r})-6-(Hydroxymethyl)cyclohexane-1,2,3, 4,5-Pentol, M96=(1~{s},2~{r},3~{s},4~{r},5~{r})-5-(Hydroxymethyl) cyclohexane-1,2,3,4-Tetrol, MAN=Alpha-D-Mannopyranose. PDB code: 6zbx(A).
		12. Ligand: QE8-MAN × 1 QE8=(1~{r},2~{r},3~{r},4~{s},5~{r})-4-[[(1~{s},2~{s},3~{s}, 4~{r},5~{r})-5-(Hydroxymethyl)-2,3,4- Tris(oxidanyl) cyclohexyl]oxymethyl]cyclohexane-1,2,3,5-Tetrol, MAN=Alpha-D-Mannopyranose. PDB code: 6zbm(A).
		13. Ligand: UKQ × 1 (1r,6s)-5beta-(Hydroxymethyl)-7- Oxabicyclo[4.1.0]heptane-2beta,3beta,4alpha-Triol PDB code: 7nl5(A).
		14. Ligand: UKT × 1 (1r,2r,3r,4s,5r)-4-(Hydroxymethyl)cyclohexane-1,2,3,5- Tetrol PDB code: 7nl5(A).

Cluster 2 contains 1 ligand type

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Ligand		Description
		1. Ligand: EDO × 1 1,2-Ethanediol PDB code: 4d4a(A).

Cluster 3 contains 1 ligand type

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Ligand		Description
		1. Ligand: EDO × 1 1,2-Ethanediol PDB code: 4d4a(A).

Cluster 4 contains 1 ligand type

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Ligand		Description
		1. Ligand: EDO × 2 1,2-Ethanediol PDB codes: 5m77(A),

Cluster 5 contains 1 ligand type

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Ligand		Description
		1. Ligand: EDO × 2 1,2-Ethanediol PDB codes: 5m77(A), 6zbx(A).

Cluster 6 contains 1 ligand type

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Ligand		Description
		1. Ligand: EDO × 1 1,2-Ethanediol PDB code: 5m77(A).