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Ligand clusters for UniProt code Q9XAY4

Ligand clusters for Q9XAY4: Beta-lactamase VIM-1 from Pseudomonas aeruginosa

3 ligand clusters
Cluster 1.
4 ligand types
11 ligands
Cluster 2.
1 ligand type
1 ligand
Cluster 3.
1 ligand type
1 ligand
Representative protein: 5n5hA  
JSmol
 

Structures

PDB   Schematic diagram
5n5hA    
5n5iA    
5n5gA    
7ayjA    

 

 Cluster 1 contains 4 ligand types

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Ligand Description

_Zn
 
1. Metal: _ZN × 8
PDB codes: 5n5g(A), 5n5h(A), 5n5i(A), 7ayj(A),


 
2. Ligand: LMP × 1
(2~{s},3~{r},4~{s})-2-[(2~{s},3~{r})-1,3-Bis(oxidanyl)- 1-Oxidanylidene-Butan-2-Yl]-4-
[(3~{s},5~{s})-5- (Dimethylcarbamoyl)pyrrolidin-3-Yl]sulfanyl-3-Methyl- 3,4-Dihydro-2~{h}-Pyrrole-
5-Carboxylic acid
PDB code: 5n5i(A).


 
3. Ligand: S3C × 1
(2z)-2-Sulfanyl-3-(2,3,6-Trichlorophenyl)prop-2-Enoic acid
PDB code: 5n5h(A).


 
4. Ligand: S9N × 1
3-(4-Fluorophenyl)-1-Sulfamoyl-Pyrrole-2-Carboxylic acid
PDB code: 7ayj(A).

 

 Cluster 2 contains 1 ligand type

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Ligand Description


 
1. Ligand: BCN × 1
Bicine
PDB code: 5n5g(A).

 

 Cluster 3 contains 1 ligand type

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Ligand Description

_Zn
 
1. Metal: _ZN × 1
PDB code: 5n5i(A).

 

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