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Ligand clusters for UniProt code Q9X0Z6
Ligand clusters for Q9X0Z6: [FeFe] hydrogenase maturase subunit HydE from Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099)
Top 6 (of 11) ligand clusters
Cluster 1.
5 ligand types
10 ligands
Cluster 2.
2 ligand types
3 ligands
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
2 ligand types
2 ligands
Cluster 5.
1 ligand type
1 ligand
Cluster 6.
1 ligand type
1 ligand
Representative protein: 7o1oA
Structures
PDB
Schematic diagram
7o1o
A
7o1t
A
7o25
A
Cluster 1 contains 5 ligand types
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Ligand
Description
1. Ligand:
CYS × 3
cysteine
PDB codes:
7o1o
(A),
7o1t
(A),
7o25
(A).
2. Ligand:
SF4 × 3
Iron/sulfur cluster
PDB codes:
7o1o
(A),
7o1t
(A),
7o25
(A).
3. Ligand:
5X8 × 2
S-Adenosyl-L-Cysteine
PDB codes:
7o1t
(A),
7o25
(A).
4. Ligand:
SAH × 1
S-Adenosyl-L-Homocysteine
PDB code:
7o1o
(A).
5. Ligand:
SAM-MET × 1
SAM
=S-Adenosylmethionine.
PDB code:
7o25
(A).
Cluster 2 contains 2 ligand types
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Ligand
Description
1. Ligand:
CPS × 2
3-[(3-Cholamidopropyl)dimethylammonio]-1- Propanesulfonate
PDB codes:
7o1t
(A),
7o25
(A).
2. Ligand:
PO4 × 1
Phosphate ion
PDB code:
7o1o
(A).
Cluster 3 contains 1 ligand type
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Ligand
Description
1. Ligand:
CPS × 1
3-[(3-Cholamidopropyl)dimethylammonio]-1- Propanesulfonate
PDB code:
7o25
(A).
Cluster 4 contains 2 ligand types
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Ligand
Description
1. Ligand:
GOL × 1
glycerin
Glycerol
PDB code:
7o1o
(A).
2. Ligand:
TAM × 1
Tris(hydroxyethyl)aminomethane
PDB code:
7o25
(A).
Cluster 5 contains 1 ligand type
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Ligand
Description
1. Ligand:
PYR × 1
pyruvic acid
Pyruvic acid
PDB code:
7o1t
(A).
Cluster 6 contains 1 ligand type
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Ligand
Description
1. Ligand:
GOL × 1
glycerin
Glycerol
PDB code:
7o25
(A).