Ligand clusters for UniProt code Q9V2F3

Ligand clusters for Q9V2F3: DNA polymerase II small subunit from Pyrococcus abyssi (strain GE5 / Orsay)

		3 ligand clusters Cluster 1. 4 ligand types 8 ligands Cluster 2. 1 ligand type 2 ligands Cluster 3. 1 ligand type 1 ligand
Representative protein: 5iheA

Structures

PDB		Schematic diagram
5iheA
6hmfA
6t8hA

Cluster 1 contains 4 ligand types

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Ligand		Description
_Fe		1. Metal: _FE × 3 PDB codes: 5ihe(A), 6hmf(A), 6t8h(A).
_Zn		2. Metal: _ZN × 3 PDB codes: 5ihe(A), 6hmf(A), 6t8h(A).
		3. Ligand: CAC × 1 Cacodylate ion PDB code: 6hmf(A).
		4. Ligand: D5M × 1 2'-Deoxyadenosine-5'-Monophosphate PDB code: 5ihe(A).

Cluster 2 contains 1 ligand type

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Ligand		Description
		1. Ligand: ACT × 2 Acetate ion PDB codes: 5ihe(A), 6hmf(A).

Cluster 3 contains 1 ligand type

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Ligand		Description
_Ca		1. Metal: _CA × 1 PDB code: 5ihe(A).