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Ligand clusters for UniProt code Q9RIK9

Ligand clusters for Q9RIK9: Beta-mannosidase from Thermotoga maritima

5 ligand clusters
Cluster 1.
2 ligand types
2 ligands
Cluster 2.
2 ligand types
2 ligands
Cluster 3.
1 ligand type
2 ligands
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
1 ligand
Representative protein: 1of3A  
JSmol
 

Structures

PDB   Schematic diagram
1of3A    
1oh4A    
1of4A    

 

 Cluster 1 contains 2 ligand types

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Ligand Description


 
1. Ligand: BMA-BMA-BMA-BMA-BMA × 1
BMA=Beta-D-Mannopyranose.
PDB code: 1of4(A).


 
2. Ligand: BMA-BMA-BMA-BMA-BMA-GLA-GLA × 1
BMA=Beta-D-Mannopyranose, GLA=Alpha-D-Galactopyranose.
PDB code: 1oh4(A).

 

 Cluster 2 contains 2 ligand types

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Ligand Description


 
1. Ligand: GOL × 1
glycerin
Glycerol
PDB code: 1of4(A).


 
2. Ligand: SO4 × 1
Sulfate ion
PDB code: 1oh4(A).

 

 Cluster 3 contains 1 ligand type

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Ligand Description


 
1. Ligand: GOL × 2
glycerin
Glycerol
PDB codes: 1of4(A), 1oh4(A).

 

 Cluster 4 contains 1 ligand type

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Ligand Description


 
1. Ligand: GOL × 1
glycerin
Glycerol
PDB code: 1oh4(A).

 

 Cluster 5 contains 1 ligand type

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Ligand Description

_Ca
 
1. Metal: _CA × 1
PDB code: 1of3(A).

 

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