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Ligand clusters for UniProt code Q9NYA1

Ligand clusters for Q9NYA1: Sphingosine kinase 1 from Homo sapiens

Top 6 (of 13) ligand clusters
Cluster 1.
4 ligand types
7 ligands
Cluster 2.
1 ligand type
1 ligand
Cluster 3.
2 ligand types
2 ligands
Cluster 4.
1 ligand type
2 ligands
Cluster 5.
1 ligand type
1 ligand
Cluster 6.
1 ligand type
1 ligand
Representative protein: 3vzbA  
JSmol
 

Structures

PDB   Schematic diagram
3vzbA    
4l02A    
3vzbB    
4l02B    
4v24A    
 more ...

 

 Cluster 1 contains 4 ligand types

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Ligand Description


 
1. Ligand: 1V2 × 2
(2r,4s)-1-[2-(4-{[4-(3,4-Dichlorophenyl)-1,3-Thiazol-2- Yl]amino}phenyl)ethyl]-2-
(Hydroxymethyl)piperidin-4-Ol
PDB codes: 4l02(A),


 
2. Ligand: SQS × 2
(2s,3r,4e)-2-Aminooctadec-4-Ene-1,3-Diol
PDB codes: 3vzb(A),


 
3. Ligand: UUL × 2
4-{[4-(4-Chlorophenyl)-1,3-Thiazol-2-Yl]amino}phenol
PDB codes: 3vzc(A), 3vzd(A).


 
4. Ligand: GYR × 1
{(2r)-1-[4-({3-Methyl-5-[(Phenylsulfonyl) methyl]phenoxy}methyl)benzyl]pyrrolidin-2-Yl}methanol
PDB code: 4v24(A).

 

 Cluster 2 contains 1 ligand type

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Ligand Description


 
1. Ligand: UUL × 1
4-{[4-(4-Chlorophenyl)-1,3-Thiazol-2-Yl]amino}phenol
PDB code: 3vzd(A).

 

 Cluster 3 contains 2 ligand types

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Ligand Description


 
1. Ligand: ACT × 1
Acetate ion
PDB code: 4v24(A).


 
2. Ligand: EDO × 1
1,2-Ethanediol
PDB code: 3vzb(B).

 

 Cluster 4 contains 1 ligand type

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Ligand Description


 
1. Ligand: SO4 × 2
Sulfate ion
PDB codes: 3vzb(A),

 

 Cluster 5 contains 1 ligand type

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Ligand Description


 
1. Ligand: EDO × 1
1,2-Ethanediol
PDB code: 3vzb(A).

 

 Cluster 6 contains 1 ligand type

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Ligand Description


 
1. Ligand: EDO × 1
1,2-Ethanediol
PDB code: 3vzb(A).

 

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