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EBI
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PDBsum
Ligand clusters for UniProt code Q9LCC8
Ligand clusters for Q9LCC8: D-Amino acid amidase OS=Ochrobactrum anthropi GN=daaA PE=1 SV=1
Top 6 (of 9) ligand clusters
Cluster 1.
3 ligand types
5 ligands
Cluster 2.
1 ligand type
7 ligands
Cluster 3.
1 ligand type
4 ligands
Cluster 4.
1 ligand type
5 ligands
Cluster 5.
1 ligand type
8 ligands
Cluster 6.
1 ligand type
2 ligands
Representative protein: 2dnsA
Structures
PDB
Schematic diagram
2dns
A
2efx
A
2efu
A
2drw
F
2drw
A
more ...
Cluster 1 contains 3 ligand types
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Ligand
Description
1. Ligand:
PHE × 2
phenylalanine
PDB codes:
2efu
(A),
2. Ligand:
NFA × 2
Phenylalanine amide
PDB codes:
2efx
(A),
3. Ligand:
DPN × 1
D-Phenylalanine
PDB code:
2dns
(A).
Cluster 2 contains 1 ligand type
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Ligand
Description
_Ba
1. Metal:
_BA × 7
PDB codes:
2dns
(A),
2drw
(A),
2efu
(A),
2efx
(A).
Cluster 3 contains 1 ligand type
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Ligand
Description
_Ba
1. Metal:
_BA × 4
PDB codes:
2dns
(A),
2drw
(A),
2efu
(A),
2efx
(A).
Cluster 4 contains 1 ligand type
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Ligand
Description
_Ba
1. Metal:
_BA × 5
PDB codes:
2dns
(A),
2drw
(A),
2efu
(A),
2efx
(A).
Cluster 5 contains 1 ligand type
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Ligand
Description
_Ba
1. Metal:
_BA × 8
PDB codes:
2dns
(A),
2drw
(A),
2efu
(A),
2efx
(A).
Cluster 6 contains 1 ligand type
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Ligand
Description
_Ba
1. Metal:
_BA × 2
PDB codes:
2dns
(F),
2drw
(F).