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Ligand clusters for UniProt code Q9IGQ6

Ligand clusters for Q9IGQ6: Neuraminidase from Influenza A virus (strain A/Brevig Mission/1/1918 H1N1)

Top 6 (of 12) ligand clusters
Cluster 1.
2 ligand types
5 ligands
Cluster 2.
3 ligand types
7 ligands
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
4 ligands
Cluster 6.
1 ligand type
1 ligand
Representative protein: 6lxiA  
JSmol
 

Structures

PDB   Schematic diagram
6lxiA    
3b7eA    
3beqA    
3cyeA    
6d96A    

 

 Cluster 1 contains 2 ligand types

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Ligand Description


 
1. Ligand: NAG × 4
n-acetylglucosamine
2-Acetamido-2-Deoxy-Beta-D-Glucopyranose
PDB codes: 3b7e(A), 3beq(A), 3cye(A), 6d96(A).


 
2. Ligand: NAG-NAG-BMA-MAN-FUC × 1
NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose, BMA=Beta-D-Mannopyranose, MAN=Alpha-D-Mannopyranose, FUC=Alpha-L-Fucopyranose.
PDB code: 6lxi(A).

 

 Cluster 2 contains 3 ligand types

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Ligand Description


 
1. Ligand: ZMR × 1
zanamivir
Zanamivir
PDB code: 3b7e(A).


 
2. Ligand: ACT × 4
Acetate ion
PDB codes: 3beq(A), 3cye(A),


 
3. Ligand: PO4 × 2
Phosphate ion
PDB codes: 3beq(A), 3cye(A).

 

 Cluster 3 contains 1 ligand type

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Ligand Description


 
1. Ligand: NAG × 1
n-acetylglucosamine
2-Acetamido-2-Deoxy-Beta-D-Glucopyranose
PDB code: 6d96(A).

 

 Cluster 4 contains 1 ligand type

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Ligand Description


 
1. Ligand: NAG × 1
n-acetylglucosamine
2-Acetamido-2-Deoxy-Beta-D-Glucopyranose
PDB code: 6d96(A).

 

 Cluster 5 contains 1 ligand type

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Ligand Description


 
1. Ligand: GOL × 4
glycerin
Glycerol
PDB codes: 3b7e(A), 3beq(A), 3cye(A), 6d96(A).

 

 Cluster 6 contains 1 ligand type

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Ligand Description


 
1. Ligand: GOL × 1
glycerin
Glycerol
PDB code: 3b7e(A).

 

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