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Ligand clusters for UniProt code Q9HU22

Ligand clusters for Q9HU22: Glucose-1-phosphate thymidylyltransferase from Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)

5 ligand clusters
Cluster 1.
15 ligand types
16 ligands
Cluster 2.
1 ligand type
12 ligands
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
13 ligands
Representative protein: 4b2xA  
JSmol
 

Structures

PDB   Schematic diagram
4b2xA    
4b4bA    
5fuhA    
3zlkA    
3zllA    
 more ...

 

 Cluster 1 contains 15 ligand types

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Ligand Description


 
1. Ligand: GOL × 2
glycerin
Glycerol
PDB codes: 3zll(A), 4b3u(A).


 
2. Ligand: 4WF × 1
5-Azanyl-6-Oxidanyl-1-(Phenylmethyl)pyrimidine-2,4- Dione
PDB code: 3zll(A).


 
3. Ligand: BZ0 × 1
N-(6-Amino-1-Benzyl-2,4-Dioxo-1,2,3,4- Tetrahydropyrimidin-5-Yl)benzamide
PDB code: 4b2w(A).


 
4. Ligand: DH5 × 1
N-(6-Amino-1-(4-Bromo-3-Methylbenzyl)-2,4-Dioxo-1,2,3, 4-Tetrahydropyrimidin-5-Yl)-N-
Methylbenzenesulfonamide
PDB code: 5fu8(A).


 
5. Ligand: FKH × 1
N-(6-Amino-1-(3-Methylbenzyl)-2,4-Dioxo-1,2,3,4- Tetrahydropyrimidin-5-Yl)-N-
Methylbenzenesulfonamide
PDB code: 5fu0(A).


 
6. Ligand: GJB × 1
1-(2-Phenylethyl)pyrimidine-2,4,6(1h,3h,5h)-Trione
PDB code: 4b4b(A).


 
7. Ligand: HKX × 1
N-[6-Amino-1-(3-Bromobenzyl)-2,4-Dioxo-1,2,3, 4-Tetrahydropyrimidin-5-Yl]-N-
Methylbenzenesulfonamide
PDB code: 5fuh(A).


 
8. Ligand: HNR × 1
N-(6-Amino-1-Butyl-2,4-Dioxo-1,2,3,4- Tetrahydropyrimidin-5-Yl)-N-Methyl-Benzenesulfonamide
PDB code: 4arw(A).


 
9. Ligand: JWT × 1
N-(6-Amino-1-Benzyl-2,4-Dioxo-1,2,3,4- Tetrahydropyrimidin-5-Yl)-4-Fluoro-N-
Methylbenzenesulfonamide
PDB code: 4b4m(A).


 
10. Ligand: KDT × 1
N-(6-Amino-1-(4-Bromobenzyl)-2,4-Dioxo-1,2,3,4- Tetrahydropyrimidin-5-Yl)-N-
Methylbenzenesulfonamide
PDB code: 5ftv(A).


 
11. Ligand: LD6 × 1
N-(6-Amino-1-(3-Fluorobenzyl)-2,4-Dioxo-1,2,3,4- Tetrahydropyrimidin-5-Yl)-N-
Methylbenzenesulfonamide
PDB code: 5fye(A).


 
12. Ligand: NIQ × 1
6-Amino-1-Butyl-5-(Cyclopentylamino)pyrimidine-2,4(1h, 3h)-Dione
PDB code: 4b2x(A).


 
13. Ligand: NWL × 1
6-Amino-1-Benzyl-5-(Ethylamino)pyrimidine-2,4(1h,3h)- Dione
PDB code: 4b3u(A).


 
14. Ligand: P3I × 1
N-(6-Amino-1-(2-Bromobenzyl)-2,4-Dioxo-1,2,3,4- Tetrahydropyrimidin-5-Yl)-N-
Methylbenzenesulfonamide
PDB code: 5fts(A).


 
15. Ligand: Y46 × 1
N-(6-Amino-1-Benzyl-2,4-Dioxo-1,2,3,4- Tetrahydropyrimidin-5-Yl)benzenesulfonamide
PDB code: 3zlk(A).

 

 Cluster 2 contains 1 ligand type

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Ligand Description


 
1. Ligand: MES × 12
2-(N-Morpholino)-Ethanesulfonic acid
PDB codes: 3zll(A), 4arw(A), 4b2w(A), 4b3u(A), 4b4b(A), 4b4m(A), 5fts(A), 5ftv(A), 5fu0(A), 5fu8(A), 5fuh(A), 5fye(A).

 

 Cluster 3 contains 1 ligand type

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Ligand Description


 
1. Ligand: GOL × 1
glycerin
Glycerol
PDB code: 3zll(A).

 

 Cluster 4 contains 1 ligand type

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Ligand Description


 
1. Ligand: GOL × 1
glycerin
Glycerol
PDB code: 5fuh(A).

 

 Cluster 5 contains 1 ligand type

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Ligand Description

_Cl
 
1. Metal: _CL × 13
PDB codes: 3zlk(A), 3zll(A), 4b2w(A), 4b2x(A), 4b3u(A), 4b4b(A), 4b4m(A), 5fts(A), 5ftv(A), 5fu0(A), 5fu8(A), 5fuh(A), 5fye(A).

 

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