Your browser does not support inline frames or is currently configured not to display inline frames. Content can be viewed at actual source page: inc/head.html
EBI
Databases
Structure Databases
PDBsum
Ligand clusters for UniProt code Q9H1D0
Ligand clusters for Q9H1D0: Transient receptor potential cation channel subfamily V member 6 from Homo sapiens
Top 6 (of 8) ligand clusters
Cluster 1.
8 ligand types
20 ligands
Cluster 2.
7 ligand types
12 ligands
Cluster 3.
4 ligand types
4 ligands
Cluster 4.
2 ligand types
8 ligands
Cluster 5.
1 ligand type
4 ligands
Cluster 6.
1 ligand type
2 ligands
Representative protein: 7k4eA
Structures
PDB
Schematic diagram
7k4e
A
7k4b
A
6d7t
A
7k4f
A
7k4a
A
more ...
Cluster 1 contains 8 ligand types
Use checkboxes to select ligands to display in RasMol, Jmol, or download as an SDF file.
Selection shortcuts:
select all/none
invert selection.
Ligand
Description
1. Ligand:
PCW × 11
1,2-Dioleoyl-Sn-Glycero-3-Phosphocholine
PDB codes:
7k4a
(A),
7k4b
(A),
2. Ligand:
Y01 × 3
Cholesterol hemisuccinate
PDB codes:
7k4a
(A),
7k4b
(A).
3. Ligand:
5GK × 1
5-[(4-{Cis-4-[3-(Trifluoromethyl) phenyl]cyclohexyl}piperazin-1-Yl)methyl]pyridin-2(1h)- One
PDB code:
7k4f
(A).
4. Ligand:
81F × 1
1-(5-Bromopyridin-3-Yl)-4-[Cis-4-(3-Methylphenyl) cyclohexyl]piperazine
PDB code:
7k4c
(A).
5. Ligand:
FZ4 × 1
2-Aminoethyl diphenylborinate
PDB code:
6d7t
(A).
6. Ligand:
VUG × 1
1-[Cis-4-(3-Methylphenyl)cyclohexyl]-4-(Pyridin-3-Yl) piperazine
PDB code:
7k4b
(A).
7. Ligand:
VUJ × 1
5-({4-[(1r,4s)-3'-Methyl[1,2,3,4-Tetrahydro[1,1'- Biphenyl]]-4-Yl]piperazin-1-Yl}methyl)pyridin-
2(1h)- One
PDB code:
7k4e
(A).
8. Ligand:
VUM × 1
5-[(4-{Trans-4-Hydroxy-4-[3-(Trifluoromethyl) phenyl]cyclohexyl}piperazin-1-Yl)methyl]pyridin-
2(1h)- One
PDB code:
7k4d
(A).
Cluster 2 contains 7 ligand types
Selection shortcuts:
select all/none
invert selection.
Ligand
Description
1. Ligand:
PCW × 4
1,2-Dioleoyl-Sn-Glycero-3-Phosphocholine
PDB codes:
7k4a
(A),
7k4b
(A),
2. Ligand:
Y01 × 3
Cholesterol hemisuccinate
PDB codes:
7k4a
(A),
7k4b
(A).
3. Ligand:
5GK × 1
5-[(4-{Cis-4-[3-(Trifluoromethyl) phenyl]cyclohexyl}piperazin-1-Yl)methyl]pyridin-2(1h)- One
PDB code:
7k4f
(A).
4. Ligand:
81F × 1
1-(5-Bromopyridin-3-Yl)-4-[Cis-4-(3-Methylphenyl) cyclohexyl]piperazine
PDB code:
7k4c
(A).
5. Ligand:
VUG × 1
1-[Cis-4-(3-Methylphenyl)cyclohexyl]-4-(Pyridin-3-Yl) piperazine
PDB code:
7k4b
(A).
6. Ligand:
VUJ × 1
5-({4-[(1r,4s)-3'-Methyl[1,2,3,4-Tetrahydro[1,1'- Biphenyl]]-4-Yl]piperazin-1-Yl}methyl)pyridin-
2(1h)- One
PDB code:
7k4e
(A).
7. Ligand:
VUM × 1
5-[(4-{Trans-4-Hydroxy-4-[3-(Trifluoromethyl) phenyl]cyclohexyl}piperazin-1-Yl)methyl]pyridin-
2(1h)- One
PDB code:
7k4d
(A).
Cluster 3 contains 4 ligand types
Selection shortcuts:
select all/none
invert selection.
Ligand
Description
1. Ligand:
5GK × 1
5-[(4-{Cis-4-[3-(Trifluoromethyl) phenyl]cyclohexyl}piperazin-1-Yl)methyl]pyridin-2(1h)- One
PDB code:
7k4f
(A).
2. Ligand:
81F × 1
1-(5-Bromopyridin-3-Yl)-4-[Cis-4-(3-Methylphenyl) cyclohexyl]piperazine
PDB code:
7k4c
(A).
3. Ligand:
VUG × 1
1-[Cis-4-(3-Methylphenyl)cyclohexyl]-4-(Pyridin-3-Yl) piperazine
PDB code:
7k4b
(A).
4. Ligand:
VUM × 1
5-[(4-{Trans-4-Hydroxy-4-[3-(Trifluoromethyl) phenyl]cyclohexyl}piperazin-1-Yl)methyl]pyridin-
2(1h)- One
PDB code:
7k4d
(A).
Cluster 4 contains 2 ligand types
Selection shortcuts:
select all/none
invert selection.
Ligand
Description
1. Ligand:
PCW × 6
1,2-Dioleoyl-Sn-Glycero-3-Phosphocholine
PDB codes:
7k4a
(A),
7k4b
(A),
2. Ligand:
Y01 × 2
Cholesterol hemisuccinate
PDB codes:
7k4a
(A),
7k4b
(A).
Cluster 5 contains 1 ligand type
Selection shortcuts:
select all/none
invert selection.
Ligand
Description
1. Ligand:
PCW × 4
1,2-Dioleoyl-Sn-Glycero-3-Phosphocholine
PDB codes:
7k4a
(A),
7k4b
(A),
Cluster 6 contains 1 ligand type
Selection shortcuts:
select all/none
invert selection.
Ligand
Description
1. Ligand:
PCW × 2
1,2-Dioleoyl-Sn-Glycero-3-Phosphocholine
PDB codes:
7k4a
(A),
7k4b
(A).