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Ligand clusters for UniProt code Q9GPQ4
Ligand clusters for Q9GPQ4: IAG-nucleoside hydrolase from Trypanosoma vivax
Top 6 (of 11) ligand clusters
Cluster 1.
7 ligand types
18 ligands
Cluster 2.
2 ligand types
3 ligands
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
1 ligand
Cluster 6.
1 ligand type
1 ligand
Representative protein: 2ff2A
Structures
PDB
Schematic diagram
2ff2
A
1hoz
A
1kie
A
3epx
A
1kic
A
more ...
Cluster 1 contains 7 ligand types
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Ligand
Description
1. Ligand:
GOL × 1
glycerin
Glycerol
PDB code:
1hoz
(A).
_Ca
2. Metal:
_CA × 9
PDB codes:
1hoz
(A),
1hp0
(A),
1kic
(A),
1kie
(A),
1r4f
(A),
2ff1
(A),
2ff2
(A),
3epw
(A),
3epx
(A).
3. Ligand:
IMH × 3
1,4-Dideoxy-4-Aza-1-(S)-(9-Deazahypoxanthin-9-Yl)-D- Ribitol
PDB codes:
2ff1
(A),
2ff2
(A),
3b9g
(A).
4. Ligand:
AD3 × 2
3-Deaza-Adenosine
PDB codes:
1hp0
(A),
1kie
(A).
5. Ligand:
IMQ × 1
(2r,3r,4s)-2-(Hydroxymethyl)-1-(Quinolin-8-Ylmethyl) pyrrolidine-3,4-Diol
PDB code:
3epx
(A).
6. Ligand:
JMQ × 1
7-(((2r,3r,4s)-3,4-Dihydroxy-2-(Hydroxymethyl) pyrrolidin-1-Yl)methyl)-3h-Pyrrolo[3,2-D]pyrimidin-
4(5h)-One
PDB code:
3epw
(A).
7. Ligand:
NOS × 1
Inosine
PDB code:
1kic
(A).
Cluster 2 contains 2 ligand types
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Ligand
Description
_Ni
1. Metal:
_NI × 2
PDB codes:
1kic
(A),
1kie
(A).
2. Ligand:
NOS × 1
Inosine
PDB code:
1kic
(A).
Cluster 3 contains 1 ligand type
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Ligand
Description
1. Ligand:
NOS × 1
Inosine
PDB code:
1kic
(A).
Cluster 4 contains 1 ligand type
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Ligand
Description
1. Ligand:
GOL × 1
glycerin
Glycerol
PDB code:
1hoz
(A).
Cluster 5 contains 1 ligand type
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Ligand
Description
1. Ligand:
GOL × 1
glycerin
Glycerol
PDB code:
1hoz
(A).
Cluster 6 contains 1 ligand type
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Ligand
Description
1. Ligand:
GOL × 1
glycerin
Glycerol
PDB code:
1hoz
(A).