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Ligand clusters for UniProt code Q9A8X3
Ligand clusters for Q9A8X3: Glucose-fructose oxidoreductase from Caulobacter vibrioides (strain ATCC 19089 / CB15)
Top 6 (of 13) ligand clusters
Cluster 1.
7 ligand types
11 ligands
Cluster 2.
2 ligand types
2 ligands
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
1 ligand
Cluster 6.
2 ligand types
2 ligands
Representative protein: 5a06A
Structures
PDB
Schematic diagram
5a06
A
5a02
A
5a03
A
5a04
A
5a05
A
Cluster 1 contains 7 ligand types
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Ligand
Description
1. Ligand:
GOL × 1
glycerin
Glycerol
PDB code:
5a02
(A).
2. Ligand:
SOR × 1
sorbitol
Sorbitol
PDB code:
5a06
(A).
3. Ligand:
NDP × 4
Nadph dihydro-Nicotinamide-Adenine-Dinucleotide phosphate
PDB codes:
5a03
(A),
5a04
(A),
5a05
(A),
5a06
(A).
4. Ligand:
XYP × 2
Beta-D-Xylopyranose
PDB codes:
5a03
(A),
5. Ligand:
BGC × 1
Beta-D-Glucopyranose
PDB code:
5a04
(A).
6. Ligand:
BGC-GLC-GLC × 1
BGC
=Beta-D-Glucopyranose,
GLC
=Alpha-D-Glucopyranose.
PDB code:
5a05
(A).
7. Ligand:
NAP × 1
Nadp nicotinamide-Adenine-Dinucleotide phosphate
PDB code:
5a02
(A).
Cluster 2 contains 2 ligand types
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Ligand
Description
1. Ligand:
GOL × 1
glycerin
Glycerol
PDB code:
5a02
(A).
2. Ligand:
XYP × 1
Beta-D-Xylopyranose
PDB code:
5a03
(A).
Cluster 3 contains 1 ligand type
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Ligand
Description
1. Ligand:
SOR × 1
sorbitol
Sorbitol
PDB code:
5a06
(A).
Cluster 4 contains 1 ligand type
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Ligand
Description
1. Ligand:
SOR × 1
sorbitol
Sorbitol
PDB code:
5a06
(A).
Cluster 5 contains 1 ligand type
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Ligand
Description
1. Ligand:
SOR × 1
sorbitol
Sorbitol
PDB code:
5a06
(A).
Cluster 6 contains 2 ligand types
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Ligand
Description
1. Ligand:
DIO × 1
1,4-Diethylene dioxide
PDB code:
5a04
(A).
2. Ligand:
SO4 × 1
Sulfate ion
PDB code:
5a03
(A).