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Ligand clusters for UniProt code Q9A8X3

Ligand clusters for Q9A8X3: Glucose-fructose oxidoreductase from Caulobacter vibrioides (strain ATCC 19089 / CB15)

Top 6 (of 13) ligand clusters
Cluster 1.
7 ligand types
11 ligands
Cluster 2.
2 ligand types
2 ligands
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
1 ligand
Cluster 6.
2 ligand types
2 ligands
Representative protein: 5a06A  
JSmol
 

Structures

PDB   Schematic diagram
5a06A    
5a02A    
5a03A    
5a04A    
5a05A    

 

 Cluster 1 contains 7 ligand types

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Ligand Description


 
1. Ligand: GOL × 1
glycerin
Glycerol
PDB code: 5a02(A).


 
2. Ligand: SOR × 1
sorbitol
Sorbitol
PDB code: 5a06(A).


 
3. Ligand: NDP × 4
Nadph dihydro-Nicotinamide-Adenine-Dinucleotide phosphate
PDB codes: 5a03(A), 5a04(A), 5a05(A), 5a06(A).


 
4. Ligand: XYP × 2
Beta-D-Xylopyranose
PDB codes: 5a03(A),


 
5. Ligand: BGC × 1
Beta-D-Glucopyranose
PDB code: 5a04(A).


 
6. Ligand: BGC-GLC-GLC × 1
BGC=Beta-D-Glucopyranose, GLC=Alpha-D-Glucopyranose.
PDB code: 5a05(A).


 
7. Ligand: NAP × 1
Nadp nicotinamide-Adenine-Dinucleotide phosphate
PDB code: 5a02(A).

 

 Cluster 2 contains 2 ligand types

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Ligand Description


 
1. Ligand: GOL × 1
glycerin
Glycerol
PDB code: 5a02(A).


 
2. Ligand: XYP × 1
Beta-D-Xylopyranose
PDB code: 5a03(A).

 

 Cluster 3 contains 1 ligand type

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Ligand Description


 
1. Ligand: SOR × 1
sorbitol
Sorbitol
PDB code: 5a06(A).

 

 Cluster 4 contains 1 ligand type

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Ligand Description


 
1. Ligand: SOR × 1
sorbitol
Sorbitol
PDB code: 5a06(A).

 

 Cluster 5 contains 1 ligand type

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Ligand Description


 
1. Ligand: SOR × 1
sorbitol
Sorbitol
PDB code: 5a06(A).

 

 Cluster 6 contains 2 ligand types

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Ligand Description


 
1. Ligand: DIO × 1
1,4-Diethylene dioxide
PDB code: 5a04(A).


 
2. Ligand: SO4 × 1
Sulfate ion
PDB code: 5a03(A).

 

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