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Ligand clusters for UniProt code Q9A6Q5
Ligand clusters for Q9A6Q5: Phosphomethylpyrimidine synthase from Caulobacter vibrioides (strain ATCC 19089 / CB15)
4 ligand clusters
Cluster 1.
4 ligand types
4 ligands
Cluster 2.
1 ligand type
1 ligand
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
1 ligand type
1 ligand
Representative protein: 4s2aA
Structures
PDB
Schematic diagram
4s2a
A
3epm
A
3epn
A
3epo
A
Cluster 1 contains 4 ligand types
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Ligand
Description
1. Ligand:
HMH × 1
4-Amino-5-Hydroxymethyl-2-Methylpyrimidine
PDB code:
3epm
(A).
2. Ligand:
IRN × 1
1-(5-O-Phosphono-Beta-D-Ribofuranosyl)-1h-Imidazole
PDB code:
3epn
(A).
3. Ligand:
MP5 × 1
(4-Amino-2-Methylpyrimidin-5-Yl)methyl dihydrogen phosphate
PDB code:
3epo
(A).
4. Ligand:
PO4 × 1
Phosphate ion
PDB code:
4s2a
(A).
Cluster 2 contains 1 ligand type
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Ligand
Description
1. Ligand:
SF4 × 1
Iron/sulfur cluster
PDB code:
4s2a
(A).
Cluster 3 contains 1 ligand type
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Ligand
Description
1. Ligand:
SO4 × 1
Sulfate ion
PDB code:
3epm
(A).
Cluster 4 contains 1 ligand type
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Ligand
Description
_Zn
1. Metal:
_ZN × 1
PDB code:
3epm
(A).