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Ligand clusters for UniProt code Q9A6Q5

Ligand clusters for Q9A6Q5: Phosphomethylpyrimidine synthase from Caulobacter vibrioides (strain ATCC 19089 / CB15)

4 ligand clusters
Cluster 1.
4 ligand types
4 ligands
Cluster 2.
1 ligand type
1 ligand
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
1 ligand type
1 ligand
Representative protein: 4s2aA  
JSmol
 

Structures

PDB   Schematic diagram
4s2aA    
3epmA    
3epnA    
3epoA    

 

 Cluster 1 contains 4 ligand types

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Ligand Description


 
1. Ligand: HMH × 1
4-Amino-5-Hydroxymethyl-2-Methylpyrimidine
PDB code: 3epm(A).


 
2. Ligand: IRN × 1
1-(5-O-Phosphono-Beta-D-Ribofuranosyl)-1h-Imidazole
PDB code: 3epn(A).


 
3. Ligand: MP5 × 1
(4-Amino-2-Methylpyrimidin-5-Yl)methyl dihydrogen phosphate
PDB code: 3epo(A).


 
4. Ligand: PO4 × 1
Phosphate ion
PDB code: 4s2a(A).

 

 Cluster 2 contains 1 ligand type

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Ligand Description


 
1. Ligand: SF4 × 1
Iron/sulfur cluster
PDB code: 4s2a(A).

 

 Cluster 3 contains 1 ligand type

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Ligand Description


 
1. Ligand: SO4 × 1
Sulfate ion
PDB code: 3epm(A).

 

 Cluster 4 contains 1 ligand type

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Ligand Description

_Zn
 
1. Metal: _ZN × 1
PDB code: 3epm(A).

 

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