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Ligand clusters for UniProt code Q977U7

Ligand clusters for Q977U7: Glucose 1-dehydrogenase from Haloferax mediterranei (strain ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4)

5 ligand clusters
Cluster 1.
7 ligand types
14 ligands
Cluster 2.
1 ligand type
1 ligand
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
1 ligand
Representative protein: 2b5wA  
JSmol
 

Structures

PDB   Schematic diagram
2b5wA    
2vwhA    
2vwqA    
2vwpA    
2vwgA    
 more ...

 

 Cluster 1 contains 7 ligand types

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Ligand Description


 
1. Ligand: NAP × 2
Nadp nicotinamide-Adenine-Dinucleotide phosphate
PDB codes: 2b5v(A), 2b5w(A).

_Zn
 
2. Metal: _ZN × 5
PDB codes: 2b5w(A), 2vwg(A), 2vwh(A), 2vwp(A), 2vwq(A).


 
3. Ligand: LGC × 1
gluconolactone
D-Glucono-1,5-Lactone
PDB code: 2vwg(A).


 
4. Ligand: NAP × 3
Nadp nicotinamide-Adenine-Dinucleotide phosphate
PDB codes: 2vwg(A), 2vwh(A), 2vwq(A).


 
5. Ligand: BGC × 1
Beta-D-Glucopyranose
PDB code: 2vwh(A).


 
6. Ligand: FLC × 1
Citrate anion
PDB code: 2b5w(A).


 
7. Ligand: NDP × 1
Nadph dihydro-Nicotinamide-Adenine-Dinucleotide phosphate
PDB code: 2vwp(A).

 

 Cluster 2 contains 1 ligand type

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Ligand Description

__K
 
1. Metal: __K × 1
PDB code: 2b5w(A).

 

 Cluster 3 contains 1 ligand type

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Ligand Description

__K
 
1. Metal: __K × 1
PDB code: 2b5w(A).

 

 Cluster 4 contains 1 ligand type

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Ligand Description

__K
 
1. Metal: __K × 1
PDB code: 2b5w(A).

 

 Cluster 5 contains 1 ligand type

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Ligand Description

__K
 
1. Metal: __K × 1
PDB code: 2b5w(A).

 

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