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EBI
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Structure Databases
PDBsum
Ligand clusters for UniProt code Q96YD0
Ligand clusters for Q96YD0: Type-4 uracil-DNA glycosylase from Sulfurisphaera tokodaii (strain DSM 16993 / JCM 10545 / NBRC 100140 / 7)
4 ligand clusters
Cluster 1.
1 ligand type
3 ligands
Cluster 2.
1 ligand type
3 ligands
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
1 ligand type
1 ligand
Representative protein: 4zbyA
Structures
PDB
Schematic diagram
4zby
A
4zbz
A
4zbx
A
Cluster 1 contains 1 ligand type
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Ligand
Description
1. Ligand:
MES × 3
2-(N-Morpholino)-Ethanesulfonic acid
PDB codes:
4zbx
(A),
4zby
(A),
4zbz
(A).
Cluster 2 contains 1 ligand type
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Ligand
Description
1. Ligand:
SF4 × 3
Iron/sulfur cluster
PDB codes:
4zbx
(A),
4zby
(A),
4zbz
(A).
Cluster 3 contains 1 ligand type
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Ligand
Description
1. Ligand:
URA × 1
Uracil
PDB code:
4zby
(A).
Cluster 4 contains 1 ligand type
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Ligand
Description
1. Ligand:
GOL × 1
glycerin
Glycerol
PDB code:
4zbz
(A).