Ligand clusters for UniProt code Q93ZN9

Ligand clusters for Q93ZN9: LL-diaminopimelate aminotransferase, chloroplastic from Arabidopsis thaliana

		Top 6 (of 12) ligand clusters Cluster 1. 5 ligand types 8 ligands Cluster 2. 7 ligand types 11 ligands Cluster 3. 1 ligand type 6 ligands Cluster 4. 1 ligand type 1 ligand Cluster 5. 1 ligand type 1 ligand Cluster 6. 1 ligand type 1 ligand
Representative protein: 2z20A

Structures

PDB		Schematic diagram
2z20A
3ei9A
3eibA
3ei8A
3ei5A
		more ...

Cluster 1 contains 5 ligand types

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Ligand		Description
		1. Ligand: PLP × 3 pyridoxal phosphate Pyridoxal-5'-Phosphate PDB codes: 2z1z(A), 2z20(A), 3eib(A).
		2. Ligand: PL6 × 2 (E)-N-({3-Hydroxy-2-Methyl-5-[(Phosphonooxy) methyl]pyridin-4-Yl}methylidene)-L-Glutamic acid PDB codes: 3ei9(A), 3eia(A).
		3. Ligand: PGU × 1 N-({3-Hydroxy-2-Methyl-5-[(Phosphonooxy)methyl]pyridin- 4-Yl}methyl)-L-Glutamic acid PDB code: 3ei5(A).
		4. Ligand: PL4 × 1 (2s,6s)-2-Amino-6-[({3-Hydroxy-2-Methyl-5- [(Phosphonooxy)methyl]pyridin-4- Yl}methyl) amino]heptanedioic acid PDB code: 3ei6(A).
		5. Ligand: PL5 × 1 (2s,6s)-2-Amino-6-{[(1e)-{3-Hydroxy-2-Methyl-5- [(Phosphonooxy)methyl]pyridin-4- Yl}methylidene]amino}heptanedioic acid PDB code: 3ei8(A).

Cluster 2 contains 7 ligand types

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Ligand		Description
		1. Ligand: PLP × 4 pyridoxal phosphate Pyridoxal-5'-Phosphate PDB codes: 2z1z(A), 2z20(A), 3ei8(A), 3eib(A).
		2. Ligand: MLT × 1 Malate ion PDB code: 2z1z(A).
		3. Ligand: SO4 × 1 Sulfate ion PDB code: 2z20(A).
		4. Ligand: PL6 × 2 (E)-N-({3-Hydroxy-2-Methyl-5-[(Phosphonooxy) methyl]pyridin-4-Yl}methylidene)-L-Glutamic acid PDB codes: 3ei9(A), 3eia(A).
		5. Ligand: SO4 × 1 Sulfate ion PDB code: 3eib(A).
		6. Ligand: PGU × 1 N-({3-Hydroxy-2-Methyl-5-[(Phosphonooxy)methyl]pyridin- 4-Yl}methyl)-L-Glutamic acid PDB code: 3ei5(A).
		7. Ligand: PL4 × 1 (2s,6s)-2-Amino-6-[({3-Hydroxy-2-Methyl-5- [(Phosphonooxy)methyl]pyridin-4- Yl}methyl) amino]heptanedioic acid PDB code: 3ei6(A).

Cluster 3 contains 1 ligand type

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Ligand		Description
		1. Ligand: GOL × 6 glycerin Glycerol PDB codes: 2z20(A), 3ei5(A), 3ei6(A), 3ei8(A), 3ei9(A), 3eib(A).

Cluster 4 contains 1 ligand type

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Ligand		Description
		1. Ligand: GOL × 1 glycerin Glycerol PDB code: 2z20(A).

Cluster 5 contains 1 ligand type

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Ligand		Description
		1. Ligand: GOL × 1 glycerin Glycerol PDB code: 3ei5(A).

Cluster 6 contains 1 ligand type

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Ligand		Description
		1. Ligand: GOL × 1 glycerin Glycerol PDB code: 3ei6(A).