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Ligand clusters for UniProt code Q93VE0

Ligand clusters for Q93VE0: Chlorophyll a-b binding protein, chloroplastic from Chlamydomonas reinhardtii

2 ligand clusters
Cluster 1.
7 ligand types
25 ligands
Cluster 2.
1 ligand type
1 ligand
Representative protein: 6kacY  
JSmol
 

Structures

PDB   Schematic diagram
6kacY    

 

 Cluster 1 contains 7 ligand types

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Ligand Description


 
1. Ligand: LUT × 2
lutein
(3r,3'R,6s)-4,5-Didehydro-5,6-Dihydro-Beta,Beta- Carotene-3,3'-Diol
PDB codes: 6kac(Y),


 
2. Ligand: CHL × 9
Chlorophyll b
PDB codes: 6kac(Y),


 
3. Ligand: CLA × 9
Chlorophyll a
PDB codes: 6kac(Y),


 
4. Ligand: XAT × 2
(3s,5r,6s,3'S,5'R,6'S)-5,6,5',6'-Diepoxy-5,6,5',6'- Tetrahydro-Beta,Beta-Carotene-3,3'-Diol
PDB codes: 6kac(Y),


 
5. Ligand: DGD × 1
Digalactosyl diacyl glycerol (dgdg)
PDB code: 6kac(Y).


 
6. Ligand: LHG × 1
1,2-Dipalmitoyl-Phosphatidyl-Glycerole
PDB code: 6kac(Y).


 
7. Ligand: NEX × 1
(1r,3r)-6-{(3e,5e,7e,9e,11e,13e,15e,17e)-18-[(1s,4r, 6r)-4-Hydroxy-2,2,6-Trimethyl-7-
Oxabicyclo[4.1.0]hept- 1-Yl]-3,7,12,16-Tetramethyloctadeca-1,3,5,7,9,11,13, 15,17-Nonaenylidene}-
1,5,5-Trimethylcyclohexane-1,3- Diol
PDB code: 6kac(Y).

 

 Cluster 2 contains 1 ligand type

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Ligand Description


 
1. Ligand: NEX × 1
(1r,3r)-6-{(3e,5e,7e,9e,11e,13e,15e,17e)-18-[(1s,4r, 6r)-4-Hydroxy-2,2,6-Trimethyl-7-
Oxabicyclo[4.1.0]hept- 1-Yl]-3,7,12,16-Tetramethyloctadeca-1,3,5,7,9,11,13, 15,17-Nonaenylidene}-
1,5,5-Trimethylcyclohexane-1,3- Diol
PDB code: 6kac(Y).

 

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