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Ligand clusters for UniProt code Q93J45

Ligand clusters for Q93J45: Putative dipeptidase from Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)

Top 6 (of 15) ligand clusters
Cluster 1.
10 ligand types
25 ligands
Cluster 2.
1 ligand type
4 ligands
Cluster 3.
1 ligand type
4 ligands
Cluster 4.
1 ligand type
2 ligands
Cluster 5.
1 ligand type
6 ligands
Cluster 6.
1 ligand type
1 ligand
Representative protein: 3s2jA  
JSmol
 

Structures

PDB   Schematic diagram
3s2jA    
3isiX    
3s2lA    
3itcA    
3s2nA    
 more ...

 

 Cluster 1 contains 10 ligand types

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Ligand Description

_Zn
 
1. Metal: _ZN × 16
PDB codes: 3id7(A), 3isi(X), 3itc(A), 3k5x(A), 3s2j(A), 3s2l(A), 3s2m(A), 3s2n(A),


 
2. Ligand: CIT × 1
citric acid
Citric acid
PDB code: 3itc(A).


 
3. Ligand: GOL × 1
glycerin
Glycerol
PDB code: 3itc(A).


 
4. Ligand: B88 × 1
(2s)-2-{[(S)-[(1r)-1-Aminoethyl](hydroxy) phosphoryl]methyl}butanedioic acid
PDB code: 3isi(X).


 
5. Ligand: L3A × 1
(2r)-3-[(R)-[(1r)-1-Amino-3-Methylbutyl](hydroxy) phosphoryl]-2-Methylpropanoic acid
PDB code: 3s2j(A).


 
6. Ligand: LDE × 1
(2r)-2-{[(S)-[(1r)-1-Amino-3-Methylbutyl](hydroxy) phosphoryl]methyl}pentanedioic acid
PDB code: 3s2l(A).


 
7. Ligand: P4D × 1
(2r)-2-{[(S)-[(1r)-1-Amino-2-(4-Hydroxyphenyl) ethyl](hydroxy)phosphoryl]methyl}butanedioic acid
PDB code: 3s2n(A).


 
8. Ligand: P5D × 1
(2r)-2-{[(S)-[(1r)-1-Amino-2-Phenylethyl](hydroxy) phosphoryl]methyl}butanedioic acid
PDB code: 3s2m(A).


 
9. Ligand: P8D × 1
Phosphinate pseudodipeptide l-Ala-D-Asp
PDB code: 3k5x(A).

_Cl
 
10. Metal: _CL × 1
PDB code: 3id7(A).

 

 Cluster 2 contains 1 ligand type

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Ligand Description


 
1. Ligand: EDO × 4
1,2-Ethanediol
PDB codes: 3s2j(A), 3s2l(A), 3s2m(A), 3s2n(A).

 

 Cluster 3 contains 1 ligand type

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Ligand Description


 
1. Ligand: EDO × 4
1,2-Ethanediol
PDB codes: 3s2j(A), 3s2l(A), 3s2m(A), 3s2n(A).

 

 Cluster 4 contains 1 ligand type

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Ligand Description


 
1. Ligand: EDO × 2
1,2-Ethanediol
PDB codes: 3s2j(A), 3s2n(A).

 

 Cluster 5 contains 1 ligand type

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Ligand Description


 
1. Ligand: EDO × 6
1,2-Ethanediol
PDB codes: 3s2j(A), 3s2l(A), 3s2m(A), 3s2n(A).

 

 Cluster 6 contains 1 ligand type

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Ligand Description


 
1. Ligand: EDO × 1
1,2-Ethanediol
PDB code: 3s2j(A).

 

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