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Ligand clusters for UniProt code Q93J45
Ligand clusters for Q93J45: Putative dipeptidase from Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)
Top 6 (of 15) ligand clusters
Cluster 1.
10 ligand types
25 ligands
Cluster 2.
1 ligand type
4 ligands
Cluster 3.
1 ligand type
4 ligands
Cluster 4.
1 ligand type
2 ligands
Cluster 5.
1 ligand type
6 ligands
Cluster 6.
1 ligand type
1 ligand
Representative protein: 3s2jA
Structures
PDB
Schematic diagram
3s2j
A
3isi
X
3s2l
A
3itc
A
3s2n
A
more ...
Cluster 1 contains 10 ligand types
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Ligand
Description
_Zn
1. Metal:
_ZN × 16
PDB codes:
3id7
(A),
3isi
(X),
3itc
(A),
3k5x
(A),
3s2j
(A),
3s2l
(A),
3s2m
(A),
3s2n
(A),
2. Ligand:
CIT × 1
citric acid
Citric acid
PDB code:
3itc
(A).
3. Ligand:
GOL × 1
glycerin
Glycerol
PDB code:
3itc
(A).
4. Ligand:
B88 × 1
(2s)-2-{[(S)-[(1r)-1-Aminoethyl](hydroxy) phosphoryl]methyl}butanedioic acid
PDB code:
3isi
(X).
5. Ligand:
L3A × 1
(2r)-3-[(R)-[(1r)-1-Amino-3-Methylbutyl](hydroxy) phosphoryl]-2-Methylpropanoic acid
PDB code:
3s2j
(A).
6. Ligand:
LDE × 1
(2r)-2-{[(S)-[(1r)-1-Amino-3-Methylbutyl](hydroxy) phosphoryl]methyl}pentanedioic acid
PDB code:
3s2l
(A).
7. Ligand:
P4D × 1
(2r)-2-{[(S)-[(1r)-1-Amino-2-(4-Hydroxyphenyl) ethyl](hydroxy)phosphoryl]methyl}butanedioic acid
PDB code:
3s2n
(A).
8. Ligand:
P5D × 1
(2r)-2-{[(S)-[(1r)-1-Amino-2-Phenylethyl](hydroxy) phosphoryl]methyl}butanedioic acid
PDB code:
3s2m
(A).
9. Ligand:
P8D × 1
Phosphinate pseudodipeptide l-Ala-D-Asp
PDB code:
3k5x
(A).
_Cl
10. Metal:
_CL × 1
PDB code:
3id7
(A).
Cluster 2 contains 1 ligand type
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Ligand
Description
1. Ligand:
EDO × 4
1,2-Ethanediol
PDB codes:
3s2j
(A),
3s2l
(A),
3s2m
(A),
3s2n
(A).
Cluster 3 contains 1 ligand type
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Ligand
Description
1. Ligand:
EDO × 4
1,2-Ethanediol
PDB codes:
3s2j
(A),
3s2l
(A),
3s2m
(A),
3s2n
(A).
Cluster 4 contains 1 ligand type
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Ligand
Description
1. Ligand:
EDO × 2
1,2-Ethanediol
PDB codes:
3s2j
(A),
3s2n
(A).
Cluster 5 contains 1 ligand type
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Ligand
Description
1. Ligand:
EDO × 6
1,2-Ethanediol
PDB codes:
3s2j
(A),
3s2l
(A),
3s2m
(A),
3s2n
(A).
Cluster 6 contains 1 ligand type
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Ligand
Description
1. Ligand:
EDO × 1
1,2-Ethanediol
PDB code:
3s2j
(A).