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Ligand clusters for UniProt code Q93IC2

Ligand clusters for Q93IC2: Penicillin-binding protein 2' from Staphylococcus aureus

6 ligand clusters
Cluster 1.
2 ligand types
2 ligands
Cluster 2.
2 ligand types
14 ligands
Cluster 3.
1 ligand type
5 ligands
Cluster 4.
1 ligand type
5 ligands
Cluster 5.
1 ligand type
3 ligands
Cluster 6.
1 ligand type
2 ligands
Representative protein: 1mwtA  
JSmol
 

Structures

PDB   Schematic diagram
1mwtA    
1vqqA    
1mwrA    
1mwsA    
1mwuA    

 

 Cluster 1 contains 2 ligand types

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Ligand Description


 
1. Ligand: 7EP × 1
(2r,4s)-2-[(1r)-1-{[(2,6-Dimethoxyphenyl) carbonyl]amino}-2-Oxoethyl]-5,5-Dimethyl-1,3-
Thiazolidine-4-Carboxylic acid
PDB code: 1mwu(A).


 
2. Ligand: PNM × 1
Open form - Penicillin g
PDB code: 1mwt(A).

 

 Cluster 2 contains 2 ligand types

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Ligand Description

_Cd
 
1. Metal: _CD × 9
PDB codes: 1mwr(A), 1mws(A), 1mwt(A), 1mwu(A), 1vqq(A),

_Cl
 
2. Metal: _CL × 5
PDB codes: 1mwr(A), 1mws(A), 1mwt(A), 1mwu(A), 1vqq(A).

 

 Cluster 3 contains 1 ligand type

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Ligand Description

_Cd
 
1. Metal: _CD × 5
PDB codes: 1mwr(A), 1mws(A), 1mwt(A), 1mwu(A), 1vqq(A).

 

 Cluster 4 contains 1 ligand type

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Ligand Description

_Cd
 
1. Metal: _CD × 5
PDB codes: 1mwr(A), 1mws(A), 1mwt(A), 1mwu(A), 1vqq(A).

 

 Cluster 5 contains 1 ligand type

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Ligand Description

_Cd
 
1. Metal: _CD × 3
PDB codes: 1mws(A), 1mwt(A), 1vqq(A).

 

 Cluster 6 contains 1 ligand type

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Ligand Description

_Cd
 
1. Metal: _CD × 2
PDB codes: 1mws(A), 1mwt(A).

 

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