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EBI
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PDBsum
Ligand clusters for UniProt code Q93I48
Ligand clusters for Q93I48: Amylase from Bacillus sp. KSM-K38
Top 6 (of 10) ligand clusters
Cluster 1.
1 ligand type
1 ligand
Cluster 2.
3 ligand types
5 ligands
Cluster 3.
2 ligand types
6 ligands
Cluster 4.
2 ligand types
6 ligands
Cluster 5.
1 ligand type
1 ligand
Cluster 6.
1 ligand type
1 ligand
Representative protein: 1ud2A
Structures
PDB
Schematic diagram
1ud2
A
1ud6
A
1ud5
A
1ud3
A
1ud8
A
more ...
Cluster 1 contains 1 ligand type
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Ligand
Description
1. Ligand:
GOL × 1
glycerin
Glycerol
PDB code:
1ud2
(A).
Cluster 2 contains 3 ligand types
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Ligand
Description
__K
1. Metal:
__K × 1
PDB code:
1ud6
(A).
_Na
2. Metal:
_NA × 3
PDB codes:
1ud2
(A),
1ud4
(A),
1ud8
(A).
_Rb
3. Metal:
_RB × 1
PDB code:
1ud5
(A).
Cluster 3 contains 2 ligand types
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Ligand
Description
__K
1. Metal:
__K × 1
PDB code:
1ud6
(A).
_Na
2. Metal:
_NA × 5
PDB codes:
1ud2
(A),
1ud3
(A),
1ud4
(A),
1ud5
(A),
1ud8
(A).
Cluster 4 contains 2 ligand types
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Ligand
Description
__K
1. Metal:
__K × 1
PDB code:
1ud6
(A).
_Na
2. Metal:
_NA × 5
PDB codes:
1ud2
(A),
1ud3
(A),
1ud4
(A),
1ud5
(A),
1ud8
(A).
Cluster 5 contains 1 ligand type
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Ligand
Description
_Rb
1. Metal:
_RB × 1
PDB code:
1ud5
(A).
Cluster 6 contains 1 ligand type
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Ligand
Description
_Rb
1. Metal:
_RB × 1
PDB code:
1ud5
(A).