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Ligand clusters for UniProt code Q93I48

Ligand clusters for Q93I48: Amylase from Bacillus sp. KSM-K38

Top 6 (of 10) ligand clusters
Cluster 1.
1 ligand type
1 ligand
Cluster 2.
3 ligand types
5 ligands
Cluster 3.
2 ligand types
6 ligands
Cluster 4.
2 ligand types
6 ligands
Cluster 5.
1 ligand type
1 ligand
Cluster 6.
1 ligand type
1 ligand
Representative protein: 1ud2A  
JSmol
 

Structures

PDB   Schematic diagram
1ud2A    
1ud6A    
1ud5A    
1ud3A    
1ud8A    
 more ...

 

 Cluster 1 contains 1 ligand type

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Ligand Description


 
1. Ligand: GOL × 1
glycerin
Glycerol
PDB code: 1ud2(A).

 

 Cluster 2 contains 3 ligand types

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Ligand Description

__K
 
1. Metal: __K × 1
PDB code: 1ud6(A).

_Na
 
2. Metal: _NA × 3
PDB codes: 1ud2(A), 1ud4(A), 1ud8(A).

_Rb
 
3. Metal: _RB × 1
PDB code: 1ud5(A).

 

 Cluster 3 contains 2 ligand types

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Ligand Description

__K
 
1. Metal: __K × 1
PDB code: 1ud6(A).

_Na
 
2. Metal: _NA × 5
PDB codes: 1ud2(A), 1ud3(A), 1ud4(A), 1ud5(A), 1ud8(A).

 

 Cluster 4 contains 2 ligand types

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Ligand Description

__K
 
1. Metal: __K × 1
PDB code: 1ud6(A).

_Na
 
2. Metal: _NA × 5
PDB codes: 1ud2(A), 1ud3(A), 1ud4(A), 1ud5(A), 1ud8(A).

 

 Cluster 5 contains 1 ligand type

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Ligand Description

_Rb
 
1. Metal: _RB × 1
PDB code: 1ud5(A).

 

 Cluster 6 contains 1 ligand type

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Ligand Description

_Rb
 
1. Metal: _RB × 1
PDB code: 1ud5(A).

 

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