Ligand clusters for UniProt code Q8YUQ7

Ligand clusters for Q8YUQ7: Alr2278 protein from Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)

		6 ligand clusters Cluster 1. 12 ligand types 25 ligands Cluster 2. 3 ligand types 13 ligands Cluster 3. 1 ligand type 1 ligand Cluster 4. 1 ligand type 1 ligand Cluster 5. 1 ligand type 1 ligand Cluster 6. 1 ligand type 1 ligand
Representative protein: 6dxiA

Structures

PDB		Schematic diagram
6dxiA
2o0gA
5ixxA
6mx5A
2o09A
		more ...

Cluster 1 contains 12 ligand types

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Ligand		Description
		1. Ligand: GOL × 2 glycerin Glycerol PDB codes: 7lgk(A),
		2. Ligand: DMS × 1 dimethyl sulfoxide Dimethyl sulfoxide PDB code: 5ixz(A).
		3. Ligand: HEM × 12 Protoporphyrin IX containing fe PDB codes: 2o09(A), 3tf8(A), 3tf9(A), 3tfa(A), 3tfd(A), 3tfe(A), 3tff(A), 3tfg(A), 4iam(A), 5ixz(A), 6dxi(A), 6mx5(A).
		4. Ligand: 1DX × 2 4-({(4-Carboxybutyl)[2-(5-Fluoro-2-{[4'- (Trifluoromethyl)biphenyl-4- Yl]methoxy}phenyl) ethyl]amino}methyl)benzoic acid PDB codes: 4iae(A), 4iah(A).
		5. Ligand: 1MF × 1 4-{[(4-Carboxybutyl)(2-{2-[(4'-Phenoxybiphenyl-4-Yl) methoxy]phenyl}ethyl)amino]methyl}benzoic acid PDB code: 4jqh(A).
		6. Ligand: HEM-1MZ × 1 HEM=Protoporphyrin IX containing fe, 1MZ=1-Methylimidazole. PDB code: 5ixv(A).
		7. Ligand: HEM-6EX × 1 HEM=Protoporphyrin IX containing fe, 6EX=1-(1h-Imidazol-1-Yl)ethan-1-One. PDB code: 5ixx(A).
		8. Ligand: HEM-CMO × 1 HEM=Protoporphyrin IX containing fe, CMO=Carbon monoxide. PDB code: 2o0g(A).
		9. Ligand: HEM-IMD × 1 HEM=Protoporphyrin IX containing fe, IMD=Imidazole. PDB code: 5ixr(A).
		10. Ligand: HEM-NVI × 1 HEM=Protoporphyrin IX containing fe, NVI=1-Vinylimidazole. PDB code: 5ixw(A).
		11. Ligand: XZ7 × 1 Runcaciguat PDB code: 7lgk(A).
		12. Ligand: Z90 × 1 4-({(4-Carboxybutyl)[2-(2-{[4-(2-Phenylethyl) benzyl]oxy}phenyl)ethyl]amino}methyl)benzoic acid PDB code: 3l6j(A).

Cluster 2 contains 3 ligand types

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Ligand		Description
		1. Ligand: GOL × 1 glycerin Glycerol PDB code: 7lgk(A).
		2. Ligand: MLI × 8 Malonate ion PDB codes: 4iae(A), 4iah(A), 4iam(A), 5ixr(A), 5ixv(A), 5ixw(A), 5ixx(A), 5ixz(A).
		3. Ligand: MLA × 4 Malonic acid PDB codes: 3tfe(A), 3tff(A), 3tfg(A), 4jqh(A).

Cluster 3 contains 1 ligand type

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Ligand		Description
		1. Ligand: MLA × 1 Malonic acid PDB code: 3tfe(A).

Cluster 4 contains 1 ligand type

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Ligand		Description
		1. Ligand: MLI × 1 Malonate ion PDB code: 4iae(A).

Cluster 5 contains 1 ligand type

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Ligand		Description
_Na		1. Metal: _NA × 1 PDB code: 3tf8(A).

Cluster 6 contains 1 ligand type

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Ligand		Description
_Na		1. Metal: _NA × 1 PDB code: 3tf9(A).