Your browser does not support inline frames or is currently configured not to display inline frames. Content can be viewed at actual source page: inc/head.html
EBI
Databases
Structure Databases
PDBsum
Ligand clusters for UniProt code Q8VVD2
Ligand clusters for Q8VVD2: Xylan alpha-1,2-glucuronidase from Geobacillus stearothermophilus
Top 6 (of 20) ligand clusters
Cluster 1.
4 ligand types
6 ligands
Cluster 2.
1 ligand type
3 ligands
Cluster 3.
1 ligand type
3 ligands
Cluster 4.
1 ligand type
3 ligands
Cluster 5.
1 ligand type
3 ligands
Cluster 6.
1 ligand type
2 ligands
Representative protein: 1mqqA
Structures
PDB
Schematic diagram
1mqq
A
1k9d
A
1l8n
A
Cluster 1 contains 4 ligand types
Use checkboxes to select ligands to display in RasMol, Jmol, or download as an SDF file.
Selection shortcuts:
select all/none
invert selection.
Ligand
Description
1. Ligand:
GOL × 3
glycerin
Glycerol
PDB codes:
1k9d
(A),
1l8n
(A),
1mqq
(A).
2. Ligand:
GCU × 1
Alpha-D-Glucopyranuronic acid
PDB code:
1mqq
(A).
3. Ligand:
GCW × 1
4-O-Methyl-Beta-D-Glucopyranuronic acid
PDB code:
1l8n
(A).
4. Ligand:
XYP-XYP × 1
XYP
=Beta-D-Xylopyranose.
PDB code:
1l8n
(A).
Cluster 2 contains 1 ligand type
Selection shortcuts:
select all/none
invert selection.
Ligand
Description
1. Ligand:
GOL × 3
glycerin
Glycerol
PDB codes:
1k9d
(A),
1l8n
(A),
1mqq
(A).
Cluster 3 contains 1 ligand type
Selection shortcuts:
select all/none
invert selection.
Ligand
Description
1. Ligand:
GOL × 3
glycerin
Glycerol
PDB codes:
1k9d
(A),
1l8n
(A),
1mqq
(A).
Cluster 4 contains 1 ligand type
Selection shortcuts:
select all/none
invert selection.
Ligand
Description
1. Ligand:
GOL × 3
glycerin
Glycerol
PDB codes:
1k9d
(A),
1mqq
(A).
Cluster 5 contains 1 ligand type
Selection shortcuts:
select all/none
invert selection.
Ligand
Description
1. Ligand:
GOL × 3
glycerin
Glycerol
PDB codes:
1k9d
(A),
1l8n
(A),
1mqq
(A).
Cluster 6 contains 1 ligand type
Selection shortcuts:
select all/none
invert selection.
Ligand
Description
1. Ligand:
GOL × 2
glycerin
Glycerol
PDB codes:
1k9d
(A),
1mqq
(A).