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Ligand clusters for UniProt code Q8VDF2

Ligand clusters for Q8VDF2: E3 ubiquitin-protein ligase UHRF1 from Mus musculus

Top 6 (of 17) ligand clusters
Cluster 1.
2 ligand types
2 ligands
Cluster 2.
2 ligand types
5 ligands
Cluster 3.
2 ligand types
2 ligands
Cluster 4.
2 ligand types
2 ligands
Cluster 5.
2 ligand types
2 ligands
Cluster 6.
2 ligand types
2 ligands
Representative protein: 2zkdA  
JSmol
 

Structures

PDB   Schematic diagram
2zkdA    
2zo1B    
3f8jB    
2zo2B    
3fdeA    
 more ...

 

 Cluster 1 contains 2 ligand types

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Ligand Description


 
1. Ligand: GOL × 1
glycerin
Glycerol
PDB code: 3f8j(B).


 
2. Ligand: EDO × 1
1,2-Ethanediol
PDB code: 2zo1(B).

 

 Cluster 2 contains 2 ligand types

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Ligand Description


 
1. Ligand: GOL × 3
glycerin
Glycerol
PDB codes: 3f8j(B),


 
2. Ligand: EDO × 2
1,2-Ethanediol
PDB codes: 2zo1(B), 3fde(A).

 

 Cluster 3 contains 2 ligand types

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Ligand Description


 
1. Ligand: GOL × 1
glycerin
Glycerol
PDB code: 3f8j(B).


 
2. Ligand: EDO × 1
1,2-Ethanediol
PDB code: 3fde(A).

 

 Cluster 4 contains 2 ligand types

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Ligand Description


 
1. Ligand: GOL × 1
glycerin
Glycerol
PDB code: 3f8j(B).


 
2. Ligand: EDO × 1
1,2-Ethanediol
PDB code: 3fde(A).

 

 Cluster 5 contains 2 ligand types

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Ligand Description


 
1. Ligand: GOL × 1
glycerin
Glycerol
PDB code: 3f8j(B).


 
2. Ligand: EDO × 1
1,2-Ethanediol
PDB code: 3fde(A).

 

 Cluster 6 contains 2 ligand types

Selection shortcuts: select all/none invert selection.
Ligand Description


 
1. Ligand: GOL × 1
glycerin
Glycerol
PDB code: 3f8j(B).


 
2. Ligand: EDO × 1
1,2-Ethanediol
PDB code: 3fde(A).

 

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