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EBI
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PDBsum
Ligand clusters for UniProt code Q8PC69
Ligand clusters for Q8PC69: TPR_REGION domain-containing protein from Xanthomonas campestris pv. campestris (strain ATCC 33913 / DSM 3586 / NCPPB 528 / LMG 568 / P 25)
6 ligand clusters
Cluster 1.
4 ligand types
6 ligands
Cluster 2.
1 ligand type
1 ligand
Cluster 3.
2 ligand types
2 ligands
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
1 ligand
Cluster 6.
1 ligand type
1 ligand
Representative protein: 2jlbA
Structures
PDB
Schematic diagram
2jlb
A
2xgo
A
2vsy
A
2xgs
A
2xgs
B
more ...
Cluster 1 contains 4 ligand types
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Ligand
Description
1. Ligand:
44P × 2
5'-O-[(S)-Hydroxy(phosphonomethyl)phosphoryl] uridine
PDB codes:
2xgs
(A),
2. Ligand:
LXN × 2
Alloxan
PDB codes:
2xgm
(A),
3. Ligand:
UDM × 1
Uridine-Diphosphate-Methylene-N-Acetyl- Glucosamine
PDB code:
2jlb
(A).
4. Ligand:
ZKD × 1
Uridine-Diphosphate-1-Deoxy-1-Thio-N- Acetylglucosamine
PDB code:
2xgo
(A).
Cluster 2 contains 1 ligand type
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Ligand
Description
1. Ligand:
NHE × 1
2-[N-Cyclohexylamino]ethane sulfonic acid
PDB code:
2vsy
(A).
Cluster 3 contains 2 ligand types
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Ligand
Description
1. Ligand:
PEG × 1
Di(hydroxyethyl)ether
PDB code:
2vsy
(A).
_Pr
2. Metal:
_PR × 1
PDB code:
2vsy
(A).
Cluster 4 contains 1 ligand type
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Ligand
Description
1. Ligand:
PEG × 1
Di(hydroxyethyl)ether
PDB code:
2vsy
(A).
Cluster 5 contains 1 ligand type
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Ligand
Description
_Mn
1. Metal:
_MN × 1
PDB code:
2jlb
(A).
Cluster 6 contains 1 ligand type
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Ligand
Description
_Pr
1. Metal:
_PR × 1
PDB code:
2vsy
(A).