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Ligand clusters for UniProt code Q8C6L5

Ligand clusters for Q8C6L5: Cyclic GMP-AMP synthase from Mus musculus

2 ligand clusters
Cluster 1.
9 ligand types
13 ligands
Cluster 2.
1 ligand type
18 ligands
Representative protein: 4k8vC  
JSmol
 

Structures

PDB   Schematic diagram
4k8vC    
7joaK    
7jo9K    
6xjdK    
6x59K    
 more ...

 

 Cluster 1 contains 9 ligand types

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Ligand Description

_Mg
 
1. Metal: _MG × 4
PDB codes: 4k97(A), 4k99(A),


 
2. Ligand: 1SY × 2
Cgamp
PDB codes: 4lez(A), 7buq(A).


 
3. Ligand: 5GP × 1
Guanosine-5'-Monophosphate
PDB code: 7buj(A).


 
4. Ligand: A9Y × 1
(3r)-3-[1-(1h-Benzimidazol-2-Yl)-5-Hydroxy-3-Methyl-1h- Pyrazol-4-Yl]-2-Benzofuran-1(3h)-One
PDB code: 5xzb(A).


 
5. Ligand: AE7 × 1
(3r)-3-[1-(3h-1lambda~4~,3-Benzothiazol-2-Yl)-5- Hydroxy-3-Methyl-1h-Pyrazol-4-Yl]-2-Benzofuran-
1(3h)- One
PDB code: 5xze(A).


 
6. Ligand: AEV × 1
2-(4,5-Dichloro-1h-Benzimidazol-2-Yl)-5-Methyl-4-[(1r)- 3-Oxo-1,3-Dihydro-2-Benzofuran-1-Yl]-1,2-
Dihydro-3h- Pyrazol-3-One
PDB code: 5xzg(A).


 
7. Ligand: ATP × 1
Adenosine-5'-Triphosphate
PDB code: 4k97(A).


 
8. Ligand: GH3-GDO × 1
GH3=3'-Deoxy-Guanosine-5'-Triphosphate, GDO=3'-Deoxy-Guanosine 5'-Monophosphate.
PDB code: 4k99(A).


 
9. Ligand: GTP × 1
Guanosine-5'-Triphosphate
PDB code: 7buj(A).

 

 Cluster 2 contains 1 ligand type

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Ligand Description

_Zn
 
1. Metal: _ZN × 18
PDB codes: 4k8v(C), 4k96(A), 4k97(A), 4k99(A), 4ley(A), 4lez(A), 4o6a(A), 5n6i(A), 5xzb(A), 5xze(A), 5xzg(A), 6x59(K), 6x5a(K), 6xjd(K), 7buj(A), 7buq(A), 7jo9(K), 7joa(K).

 

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