Your browser does not support inline frames or is currently configured not to display inline frames. Content can be viewed at actual source page: inc/head.html
EBI
Databases
Structure Databases
PDBsum
Ligand clusters for UniProt code Q8C6L5
Ligand clusters for Q8C6L5: Cyclic GMP-AMP synthase from Mus musculus
2 ligand clusters
Cluster 1.
9 ligand types
13 ligands
Cluster 2.
1 ligand type
18 ligands
Representative protein: 4k8vC
Structures
PDB
Schematic diagram
4k8v
C
7joa
K
7jo9
K
6xjd
K
6x59
K
more ...
Cluster 1 contains 9 ligand types
Use checkboxes to select ligands to display in RasMol, Jmol, or download as an SDF file.
Selection shortcuts:
select all/none
invert selection.
Ligand
Description
_Mg
1. Metal:
_MG × 4
PDB codes:
4k97
(A),
4k99
(A),
2. Ligand:
1SY × 2
Cgamp
PDB codes:
4lez
(A),
7buq
(A).
3. Ligand:
5GP × 1
Guanosine-5'-Monophosphate
PDB code:
7buj
(A).
4. Ligand:
A9Y × 1
(3r)-3-[1-(1h-Benzimidazol-2-Yl)-5-Hydroxy-3-Methyl-1h- Pyrazol-4-Yl]-2-Benzofuran-1(3h)-One
PDB code:
5xzb
(A).
5. Ligand:
AE7 × 1
(3r)-3-[1-(3h-1lambda~4~,3-Benzothiazol-2-Yl)-5- Hydroxy-3-Methyl-1h-Pyrazol-4-Yl]-2-Benzofuran-
1(3h)- One
PDB code:
5xze
(A).
6. Ligand:
AEV × 1
2-(4,5-Dichloro-1h-Benzimidazol-2-Yl)-5-Methyl-4-[(1r)- 3-Oxo-1,3-Dihydro-2-Benzofuran-1-Yl]-1,2-
Dihydro-3h- Pyrazol-3-One
PDB code:
5xzg
(A).
7. Ligand:
ATP × 1
Adenosine-5'-Triphosphate
PDB code:
4k97
(A).
8. Ligand:
GH3-GDO × 1
GH3
=3'-Deoxy-Guanosine-5'-Triphosphate,
GDO
=3'-Deoxy-Guanosine 5'-Monophosphate.
PDB code:
4k99
(A).
9. Ligand:
GTP × 1
Guanosine-5'-Triphosphate
PDB code:
7buj
(A).
Cluster 2 contains 1 ligand type
Selection shortcuts:
select all/none
invert selection.
Ligand
Description
_Zn
1. Metal:
_ZN × 18
PDB codes:
4k8v
(C),
4k96
(A),
4k97
(A),
4k99
(A),
4ley
(A),
4lez
(A),
4o6a
(A),
5n6i
(A),
5xzb
(A),
5xze
(A),
5xzg
(A),
6x59
(K),
6x5a
(K),
6xjd
(K),
7buj
(A),
7buq
(A),
7jo9
(K),
7joa
(K).