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Ligand clusters for UniProt code Q8A4Q5

Ligand clusters for Q8A4Q5: Putative haloacid dehalogenase-like hydrolase from Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC 10582 / E50 / VPI-5482)

5 ligand clusters
Cluster 1.
6 ligand types
11 ligands
Cluster 2.
1 ligand type
1 ligand
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
1 ligand
Representative protein: 4dfdA  
JSmol
 

Structures

PDB   Schematic diagram
4dfdA    
4dccA    
4f72A    
4f71A    

 

 Cluster 1 contains 6 ligand types

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Ligand Description

_Mg
 
1. Metal: _MG × 3
PDB codes: 4dfd(A), 4f71(A), 4f72(A).


 
2. Ligand: GOL × 2
glycerin
Glycerol
PDB codes: 4f71(A), 4f72(A).


 
3. Ligand: PO4 × 2
Phosphate ion
PDB codes: 4f71(A), 4f72(A).

_Cl
 
4. Metal: _CL × 2
PDB codes: 4dcc(A), 4dfd(A).


 
5. Ligand: UNL × 1
Unknown ligand
PDB code: 4dcc(A).

_Na
 
6. Metal: _NA × 1
PDB code: 4dcc(A).

 

 Cluster 2 contains 1 ligand type

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Ligand Description


 
1. Ligand: UNL × 1
Unknown ligand
PDB code: 4dfd(A).

 

 Cluster 3 contains 1 ligand type

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Ligand Description

_Na
 
1. Metal: _NA × 1
PDB code: 4dcc(A).

 

 Cluster 4 contains 1 ligand type

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Ligand Description

_Cl
 
1. Metal: _CL × 1
PDB code: 4dfd(A).

 

 Cluster 5 contains 1 ligand type

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Ligand Description

_Cl
 
1. Metal: _CL × 1
PDB code: 4f71(A).

 

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