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EBI
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PDBsum
Ligand clusters for UniProt code Q86YT6
Ligand clusters for Q86YT6: E3 ubiquitin-protein ligase MIB1 from Homo sapiens
6 ligand clusters
Cluster 1.
2 ligand types
2 ligands
Cluster 2.
1 ligand type
2 ligands
Cluster 3.
1 ligand type
3 ligands
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
3 ligands
Cluster 6.
1 ligand type
3 ligands
Representative protein: 4xi6A
Structures
PDB
Schematic diagram
4xi6
A
4xi7
A
4xib
A
Cluster 1 contains 2 ligand types
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Ligand
Description
1. Ligand:
ASN-ILE-ILE-LYS-ASN-THR-TRP × 1
PDB code:
4xib
(A).
2. Ligand:
GLN-ILE-LYS-ASN-PRO-ILE × 1
PDB code:
4xi7
(A).
Cluster 2 contains 1 ligand type
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Ligand
Description
1. Ligand:
SO4 × 2
Sulfate ion
PDB codes:
4xi6
(A),
4xi7
(A).
Cluster 3 contains 1 ligand type
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Ligand
Description
1. Ligand:
SO4 × 3
Sulfate ion
PDB codes:
4xi6
(A),
4xi7
(A),
4xib
(A).
Cluster 4 contains 1 ligand type
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Ligand
Description
1. Ligand:
SO4 × 1
Sulfate ion
PDB code:
4xib
(A).
Cluster 5 contains 1 ligand type
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Ligand
Description
_Zn
1. Metal:
_ZN × 3
PDB codes:
4xi6
(A),
4xi7
(A),
4xib
(A).
Cluster 6 contains 1 ligand type
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Ligand
Description
_Zn
1. Metal:
_ZN × 3
PDB codes:
4xi6
(A),
4xi7
(A),
4xib
(A).