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Ligand clusters for UniProt code Q81HW2

Ligand clusters for Q81HW2: Potassium channel protein from Bacillus cereus (strain ATCC 14579 / DSM 31 / JCM 2152 / NBRC 15305 / NCIMB 9373 / NRRL B-3711)

Top 6 (of 18) ligand clusters
Cluster 1.
9 ligand types
209 ligands
Cluster 2.
2 ligand types
43 ligands
Cluster 3.
2 ligand types
27 ligands
Cluster 4.
2 ligand types
8 ligands
Cluster 5.
2 ligand types
5 ligands
Cluster 6.
2 ligand types
4 ligands
Representative protein: 2ahzA  
JSmol
 

Structures

PDB   Schematic diagram
2ahzA    
2ahyA    
2q6aA    
2q69A    
2q67A    
 more ...

 

 Cluster 1 contains 9 ligand types

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Ligand Description

__K
 
1. Metal: __K × 65
PDB codes: 2ahz(A), 3e8f(A), 3e8h(A), 3k03(A), 3k06(A), 3k0d(A), 3t1c(A), 3t2m(A), 3t4d(A), 3t4z(A), 3tcu(A), 3tet(A), 4pdv(A), 4zbm(A), 6fiz(A),


 
2. Ligand: GLY × 14
glycine
PDB codes: 4r50(A), 4r6z(B), 4r7c(C), 4rai(A), 4ro2(C), 6fiz(A).

_Na
 
3. Metal: _NA × 56
PDB codes: 2ahy(A), 2q67(A), 2q68(A), 2q6a(A), 3e83(A), 3e86(A), 3e89(A), 3e8g(A), 3k04(A), 3k08(A), 3k0g(A), 4pdl(A), 4pdr(A), 4rai(A), 6cpv(A),


 
4. Ligand: MPD × 19
(4s)-2-Methyl-2,4-Pentanediol
PDB codes: 3e86(A), 3e89(A), 3e8b(A), 3e8f(A), 3e8g(A), 3e8h(A), 3k03(A), 3k04(A), 3k06(A), 3k08(A), 3k0d(A), 3k0g(A), 4r6z(A), 4r7c(C), 4r8c(A), 4rai(A).

_Rb
 
5. Metal: _RB × 17
PDB codes: 3e8b(A), 4pdm(A), 4r8c(A),

_Cs
 
6. Metal: _CS × 15
PDB codes: 3e83(A), 3e86(A), 3e89(A), 3e8g(A), 4pdl(A), 4r6z(A),

_Ca
 
7. Metal: _CA × 12
PDB codes: 2ahy(A), 2ahz(A), 2q67(A), 2q68(A), 2q69(A), 2q6a(A), 3e86(A), 3e8g(A),

_Ba
 
8. Metal: _BA × 10
PDB codes: 3e8f(A), 4pdr(A), 4pdv(A), 4zbm(A),


 
9. Ligand: HEX × 1
Hexane
PDB code: 4pdl(A).

 

 Cluster 2 contains 2 ligand types

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Ligand Description


 
1. Ligand: GLY × 11
glycine
PDB codes: 4r6z(B), 4r7c(C), 4r8c(A), 4ro2(A),


 
2. Ligand: MPD × 32
(4s)-2-Methyl-2,4-Pentanediol
PDB codes: 3e86(B), 3e89(B), 3e8b(B), 3e8f(B), 3e8g(A), 3e8h(B), 3k03(A), 3k04(A), 3k06(A), 3k08(A), 3k0d(A), 3k0g(A), 4pdl(A), 4pdm(A), 4pdv(A), 4r6z(A), 4r7c(C), 4rai(B), 6cpv(A), 6ufe(A),

 

 Cluster 3 contains 2 ligand types

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Ligand Description


 
1. Ligand: GLY × 13
glycine
PDB codes: 4r7c(A), 4r8c(B), 4rai(B), 4ro2(C), 6fiz(A).


 
2. Ligand: MPD × 14
(4s)-2-Methyl-2,4-Pentanediol
PDB codes: 3k03(A), 3k04(A), 3k06(A), 3k08(A), 4pdl(A), 4pdv(A), 4r7c(A), 4r8c(B), 4rai(A), 6ufe(A).

 

 Cluster 4 contains 2 ligand types

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Ligand Description


 
1. Ligand: GLY × 3
glycine
PDB codes: 4r7c(A), 4rai(B), 4ro2(C).


 
2. Ligand: MPD × 5
(4s)-2-Methyl-2,4-Pentanediol
PDB codes: 3k03(B), 3k04(B), 3k06(B), 3k08(B), 3k0g(B).

 

 Cluster 5 contains 2 ligand types

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Ligand Description


 
1. Ligand: GLY × 3
glycine
PDB codes: 4r50(B), 4r8c(A), 4rai(A).


 
2. Ligand: MPD × 2
(4s)-2-Methyl-2,4-Pentanediol
PDB codes: 3k0d(B), 3k0g(B).

 

 Cluster 6 contains 2 ligand types

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Ligand Description


 
1. Ligand: GLY × 3
glycine
PDB codes: 4r50(B), 4r6z(B), 4r7c(C).


 
2. Ligand: MPD × 1
(4s)-2-Methyl-2,4-Pentanediol
PDB code: 6ufe(A).

 

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