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Ligand clusters for UniProt code Q7SIC2
Ligand clusters for Q7SIC2: Quercetin 2,3-dioxygenase from Aspergillus japonicus
Top 6 (of 16) ligand clusters
Cluster 1.
5 ligand types
5 ligands
Cluster 2.
4 ligand types
5 ligands
Cluster 3.
5 ligand types
6 ligands
Cluster 4.
1 ligand type
5 ligands
Cluster 5.
1 ligand type
5 ligands
Cluster 6.
1 ligand type
5 ligands
Representative protein: 1h1iA
Structures
PDB
Schematic diagram
1h1i
A
1gqh
A
1h1m
A
1juh
A
1gqg
A
Cluster 1 contains 5 ligand types
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Ligand
Description
1. Ligand:
NAG-NAG × 1
NAG
=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose.
PDB code:
1h1i
(A).
2. Ligand:
NAG-NAG-BMA × 1
NAG
=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose,
BMA
=Beta-D-Mannopyranose.
PDB code:
1gqg
(A).
3. Ligand:
NAG-NAG-BMA-MAN-MAN × 1
NAG
=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose,
BMA
=Beta-D-Mannopyranose,
MAN
=Alpha-D-Mannopyranose.
PDB code:
1h1m
(A).
4. Ligand:
NAG-NAG-BMA-MAN-MAN-MAN-MAN × 1
NAG
=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose,
BMA
=Beta-D-Mannopyranose,
MAN
=Alpha-D-Mannopyranose.
PDB code:
1juh
(A).
5. Ligand:
NAG-NAG-MAN × 1
NAG
=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose,
MAN
=Alpha-D-Mannopyranose.
PDB code:
1gqh
(A).
Cluster 2 contains 4 ligand types
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Ligand
Description
1. Ligand:
NAG-NAG-BMA-MAN × 2
NAG
=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose,
BMA
=Beta-D-Mannopyranose,
MAN
=Alpha-D-Mannopyranose.
PDB codes:
1h1m
(A),
1juh
(A).
2. Ligand:
NAG-NAG × 1
NAG
=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose.
PDB code:
1h1i
(A).
3. Ligand:
NAG-NAG-BMA × 1
NAG
=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose,
BMA
=Beta-D-Mannopyranose.
PDB code:
1gqg
(A).
4. Ligand:
NAG-NAG-MAN-MAN × 1
NAG
=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose,
MAN
=Alpha-D-Mannopyranose.
PDB code:
1gqh
(A).
Cluster 3 contains 5 ligand types
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Ligand
Description
1. Ligand:
EDO × 2
1,2-Ethanediol
PDB codes:
1juh
(A),
2. Ligand:
DCD × 1
Diethylcarbamodithioic acid
PDB code:
1gqg
(A).
3. Ligand:
KMP × 1
3,5,7-Trihydroxy-2-(4-Hydroxyphenyl)-4h-Chromen-4-One
PDB code:
1h1m
(A).
4. Ligand:
KOJ × 1
5-Hydroxy-2-(Hydroxymethyl)-4h-Pyran-4-One
PDB code:
1gqh
(A).
5. Ligand:
QUE × 1
3,5,7,3',4'-Pentahydroxyflavone
PDB code:
1h1i
(A).
Cluster 4 contains 1 ligand type
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Ligand
Description
1. Ligand:
NAG × 5
n-acetylglucosamine
2-Acetamido-2-Deoxy-Beta-D-Glucopyranose
PDB codes:
1gqg
(A),
1gqh
(A),
1h1i
(A),
1h1m
(A),
1juh
(A).
Cluster 5 contains 1 ligand type
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Ligand
Description
1. Ligand:
NAG × 5
n-acetylglucosamine
2-Acetamido-2-Deoxy-Beta-D-Glucopyranose
PDB codes:
1gqg
(A),
1gqh
(A),
1h1i
(A),
1h1m
(A),
1juh
(A).
Cluster 6 contains 1 ligand type
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Ligand
Description
1. Ligand:
NAG × 5
n-acetylglucosamine
2-Acetamido-2-Deoxy-Beta-D-Glucopyranose
PDB codes:
1gqg
(A),
1gqh
(A),
1h1i
(A),
1h1m
(A),
1juh
(A).