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Ligand clusters for UniProt code Q7N8J0

Ligand clusters for Q7N8J0: Uncharacterized protein from Photorhabdus laumondii subsp. laumondii (strain DSM 15139 / CIP 105565 / TT01)

Top 6 (of 21) ligand clusters
Cluster 1.
3 ligand types
4 ligands
Cluster 2.
3 ligand types
3 ligands
Cluster 3.
3 ligand types
3 ligands
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
1 ligand
Cluster 6.
2 ligand types
5 ligands
Representative protein: 5c9oA  
JSmol
 

Structures

PDB   Schematic diagram
5c9oA    
5c9pA    
5c9lA    

 

 Cluster 1 contains 3 ligand types

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Ligand Description


 
1. Ligand: GOL × 2
glycerin
Glycerol
PDB codes: 5c9o(A), 5c9p(A).


 
2. Ligand: EDO × 1
1,2-Ethanediol
PDB code: 5c9l(A).


 
3. Ligand: FUC × 1
Alpha-L-Fucopyranose
PDB code: 5c9p(A).

 

 Cluster 2 contains 3 ligand types

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Ligand Description


 
1. Ligand: GOL × 1
glycerin
Glycerol
PDB code: 5c9o(A).


 
2. Ligand: EDO × 1
1,2-Ethanediol
PDB code: 5c9l(A).


 
3. Ligand: FUC × 1
Alpha-L-Fucopyranose
PDB code: 5c9p(A).

 

 Cluster 3 contains 3 ligand types

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Ligand Description


 
1. Ligand: GOL × 1
glycerin
Glycerol
PDB code: 5c9o(A).


 
2. Ligand: EDO × 1
1,2-Ethanediol
PDB code: 5c9l(A).


 
3. Ligand: FUC × 1
Alpha-L-Fucopyranose
PDB code: 5c9p(A).

 

 Cluster 4 contains 1 ligand type

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Ligand Description


 
1. Ligand: PG4 × 1
Tetraethylene glycol
PDB code: 5c9l(A).

 

 Cluster 5 contains 1 ligand type

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Ligand Description


 
1. Ligand: PG4 × 1
Tetraethylene glycol
PDB code: 5c9l(A).

 

 Cluster 6 contains 2 ligand types

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Ligand Description


 
1. Ligand: GOL × 4
glycerin
Glycerol
PDB codes: 5c9o(A), 5c9p(A).


 
2. Ligand: EDO × 1
1,2-Ethanediol
PDB code: 5c9l(A).

 

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