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Ligand clusters for UniProt code Q7CSI0

Ligand clusters for Q7CSI0: Isomerase/lactonizing enzyme from Agrobacterium fabrum (strain C58 / ATCC 33970)

Top 6 (of 17) ligand clusters
Cluster 1.
5 ligand types
9 ligands
Cluster 2.
3 ligand types
4 ligands
Cluster 3.
2 ligand types
3 ligands
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
1 ligand
Cluster 6.
1 ligand type
1 ligand
Representative protein: 4hcdA  
JSmol
 

Structures

PDB   Schematic diagram
4hcdA    
4mmwA    
4hchA    
4hclA    

 

 Cluster 1 contains 5 ligand types

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Ligand Description

_Mg
 
1. Metal: _MG × 4
PDB codes: 4hcd(A), 4hch(A), 4hcl(A), 4mmw(A).


 
2. Ligand: GOL × 1
glycerin
Glycerol
PDB code: 4hch(A).


 
3. Ligand: LLH × 2
(2r,3s,4r)-2,3,4-Trihydroxy-5-(Hydroxyamino)-5- Oxopentanoic acid
PDB codes: 4hcl(A), 4mmw(A).


 
4. Ligand: TLA × 1
L(+)-Tartaric acid
PDB code: 4hch(A).


 
5. Ligand: XYH × 1
Xylarohydroxamate
PDB code: 4mmw(A).

 

 Cluster 2 contains 3 ligand types

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Ligand Description


 
1. Ligand: LLH × 2
(2r,3s,4r)-2,3,4-Trihydroxy-5-(Hydroxyamino)-5- Oxopentanoic acid
PDB codes: 4hcl(A), 4mmw(A).


 
2. Ligand: TLA × 1
L(+)-Tartaric acid
PDB code: 4hch(A).


 
3. Ligand: XYH × 1
Xylarohydroxamate
PDB code: 4mmw(A).

 

 Cluster 3 contains 2 ligand types

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Ligand Description


 
1. Ligand: PGE × 2
Triethylene glycol
PDB codes: 4hch(A), 4mmw(A).


 
2. Ligand: PG4 × 1
Tetraethylene glycol
PDB code: 4hcl(A).

 

 Cluster 4 contains 1 ligand type

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Ligand Description


 
1. Ligand: GOL × 1
glycerin
Glycerol
PDB code: 4hch(A).

 

 Cluster 5 contains 1 ligand type

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Ligand Description


 
1. Ligand: GOL × 1
glycerin
Glycerol
PDB code: 4hch(A).

 

 Cluster 6 contains 1 ligand type

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Ligand Description


 
1. Ligand: EDO × 1
1,2-Ethanediol
PDB code: 4hch(A).

 

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