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EBI
Databases
Structure Databases
PDBsum
Ligand clusters for UniProt code Q7CSI0
Ligand clusters for Q7CSI0: Isomerase/lactonizing enzyme from Agrobacterium fabrum (strain C58 / ATCC 33970)
Top 6 (of 17) ligand clusters
Cluster 1.
5 ligand types
9 ligands
Cluster 2.
3 ligand types
4 ligands
Cluster 3.
2 ligand types
3 ligands
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
1 ligand
Cluster 6.
1 ligand type
1 ligand
Representative protein: 4hcdA
Structures
PDB
Schematic diagram
4hcd
A
4mmw
A
4hch
A
4hcl
A
Cluster 1 contains 5 ligand types
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Ligand
Description
_Mg
1. Metal:
_MG × 4
PDB codes:
4hcd
(A),
4hch
(A),
4hcl
(A),
4mmw
(A).
2. Ligand:
GOL × 1
glycerin
Glycerol
PDB code:
4hch
(A).
3. Ligand:
LLH × 2
(2r,3s,4r)-2,3,4-Trihydroxy-5-(Hydroxyamino)-5- Oxopentanoic acid
PDB codes:
4hcl
(A),
4mmw
(A).
4. Ligand:
TLA × 1
L(+)-Tartaric acid
PDB code:
4hch
(A).
5. Ligand:
XYH × 1
Xylarohydroxamate
PDB code:
4mmw
(A).
Cluster 2 contains 3 ligand types
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Ligand
Description
1. Ligand:
LLH × 2
(2r,3s,4r)-2,3,4-Trihydroxy-5-(Hydroxyamino)-5- Oxopentanoic acid
PDB codes:
4hcl
(A),
4mmw
(A).
2. Ligand:
TLA × 1
L(+)-Tartaric acid
PDB code:
4hch
(A).
3. Ligand:
XYH × 1
Xylarohydroxamate
PDB code:
4mmw
(A).
Cluster 3 contains 2 ligand types
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Ligand
Description
1. Ligand:
PGE × 2
Triethylene glycol
PDB codes:
4hch
(A),
4mmw
(A).
2. Ligand:
PG4 × 1
Tetraethylene glycol
PDB code:
4hcl
(A).
Cluster 4 contains 1 ligand type
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Ligand
Description
1. Ligand:
GOL × 1
glycerin
Glycerol
PDB code:
4hch
(A).
Cluster 5 contains 1 ligand type
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Ligand
Description
1. Ligand:
GOL × 1
glycerin
Glycerol
PDB code:
4hch
(A).
Cluster 6 contains 1 ligand type
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Ligand
Description
1. Ligand:
EDO × 1
1,2-Ethanediol
PDB code:
4hch
(A).